Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00113 ATGAAAAACCTAAAACAAGAATCATCTGCAAGTAGGACAGTCTTCTGGAAGTACAGCTTAAGGATTAGAGCTTACAACAAACCGAAGTTGGAGTACAATTTCCTACGGTCATCTCTGATAAACAAAAAGATTATACAAAGACTGCTTAGTACTTTACCTATTGATGGTAATATTAACAGCCCTTCTATCACTGTCTGTGACACTTTGCATGGGGAAACTTTCCAATATGTCATCACAATCCTCCTCTACATCAACGTAAGTCCTGCCCTTAGTGCTCGTCCTGAACAAGTAGAGAAAGTTCTTAAAACGCGGTATCATAATGCGAAGAGCAAGTTGCCTAAAGACAAAGAGCTTGACTTGCTCATTGTTATATTGCCCGATAATAATGGCTCTCTTTATGGTGATCTGAAAAGGATATGTGAAACTGACTTGGGGATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATCAATGTGAAGGTTGAGGGTAGGAATACAGTGCTTGTTGATGCACTTTCTCGACGCATTCCACTAGTTAGTGACTGGCATACGATCATTTTTGGCACTGATGTTACTCATCCACACCCTGGAGAGGACTCAAGCCCATCAATAGCAGCTGTATGTTTTGTACATATGTTGTTGCTTCTCAAGATTGGCCCGAAATTACCAAGTATGATCTTCGATTCAGGCACAGTTGTGGATTCTAAGATCTGCCATCCAACAGAATTTGACTTTTATCTTTGCAGCCTTGCTGGTATTCGGGGCACAAGCCGTCCAGCTCACTACCATGTGATGTGGGATGAAAATAATTTTAGTGCAGATGGTCTACAAAGTCTAACTAATAACCTCTGCTACACATATGCCAGATGCACCCGTTCTGTTTCTATTGTGCCCCCAGCCTATTATGCACATTTGGCTGCATTCAGGGCAAGGTTCTACATGGAACCTGAGACTTCAAACAGTGGCTCAATGACAAGTGGTGCTGTTTCTCGTGGCGGAGCGGGAGTGGCGGCTGGGTACCGTCATCTCAGCCAATTTTCTCGTTGCTTCATAAACCTCATGTGGTTTGTAGTAAATAAGTTCAACCCTCTTCAAGGCTGCCTTAGAAGAAGCTTTGAAATCTCCAATGCTTTCAAGATATTCCTGGACGTAGTACCCGTGCACCTGGAGCTAATGCTGCTGTTAGACCCCTGCCTGCACTAA 1206 0.4312 MKNLKQESSASRTVFWKYSLRIRAYNKPKLEYNFLRSSLINKKIIQRLLSTLPIDGNINSPSITVCDTLHGETFQYVITILLYINVSPALSARPEQVEKVLKTRYHNAKSKLPKDKELDLLIVILPDNNGSLYGDLKRICETDLGMSKQYLANVALKINVKVEGRNTVLVDALSRRIPLVSDWHTIIFGTDVTHPHPGEDSSPSIAAVCFVHMLLLLKIGPKLPSMIFDSGTVVDSKICHPTEFDFYLCSLAGIRGTSRPAHYHVMWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSNSGSMTSGAVSRGGAGVAAGYRHLSQFSRCFINLMWFVVNKFNPLQGCLRRSFEISNAFKIFLDVVPVHLELMLLLDPCLH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00113 401 SUPERFAMILY Ribonuclease H-like 74 312 IPR012337 -
Mepo3g00113 401 SMART Piwi_a_2 120 316 IPR003165 GO:0003676
Mepo3g00113 401 Gene3D - 224 358 IPR036397 GO:0003676
Mepo3g00113 401 SUPERFAMILY Ribonuclease H-like 230 316 IPR012337 -
Mepo3g00113 401 ProSiteProfiles Piwi domain profile. 120 208 IPR003165 GO:0003676
Mepo3g00113 401 Pfam Piwi domain 121 210 IPR003165 GO:0003676
Mepo3g00113 401 Pfam Piwi domain 230 315 IPR003165 GO:0003676
Mepo3g00113 401 Gene3D - 176 215 IPR036397 GO:0003676
Mepo3g00113 401 Gene3D - 63 173 - -
Mepo3g00113 401 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 93 209 - -
Mepo3g00113 401 ProSiteProfiles Piwi domain profile. 232 316 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00113 Mepo-Chr3 1548281 1551122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00113 231 335 Eukaryotic Initiation Factors Gene Family AT1G48410 90.476 2.69e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00113 K11593 - cit:102616587 205.297