Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00112 ATGGCAATGTTGATAGAAAATGAAGTCATGTGTTTGGGAAAGAGTCAAAGGTTCATGGAAGGAAAAGAGGTAATTAAAGGAGCACGTTGTGTTAAGAGACAAAGAAGAGAACATGCTGCTGCACCAAAAATAGGTGATGAAGGTAACAAGATGCCACAGCAACAAGTTGGTGAAAATTCTACAACTAACACTTCAAAGAGAAGCTCAAGATTTCGTGGTGTTAGCAGGCATAGATGGACTGGTCGATTTGAAGCTCACTTGTGGGACAAGCTTTCTTGGAATGCAACACAAAAGAAGAAAGGGAAGCAAGATGAGAAGTTATATGTTTCAAATATTGTAGGGGCTTATGATGAAGAAGTATCAGCTGCAAGGGCATATGATTTAGCTGCACTTAAGTATTGGGGAACATCAACTTTCACTAATTTTCCGATATCAGATTATGAGAAAGAGATAGAGATAATGAATACTATGACCAAAGAGGAGTACTTGGCCACATTAAGAAGAAAAAGCAGTGGCTTTTCAAGAGGTGTCTCAAAGTATAGAGGTGTTGCAAGGCACCATCATAATGGTAGATGGGAAGCAAGGATAGGAAGAGTTTTTGGAAACAAATACCTCTATCTTGGAACTTATAGTACACAAGAGGAAGCTGCACGTGCTTATGATATAGCTGCAATTGAGTATAGAGGAATTCATGCTGTGACCAATTTTGAATTGAGTAGCTACATAAAATGGTTAAAGCCAGAAAGTATTACAGAAGCAAAACATGAATCACAAATATTACAAAAAGAGTTTCAAAATGTGACATCCCCTAATAACTCTACTCTGTTACAAGAGTCAAAGTTATTAGCCCTTCAAAAGAGCTTTTTCATTCCAAATGACTTGAATTCCACTGAAAATCAAGAATCATCACTTGAAAACAAAAACAATCATTTCTTGAGCAACAAGTCAACTTCTCCAACTGCCCTTAGCCTTCTCCTTCGCTCTTCATTGTTTAGAGAATTACTTGAAAAGAATTCAAATGTAGCTGAGGATGAAGTTACAAAAGAGCAACAACAAATAACTAGTGATGATGAACTTGGAGGAATCTTCTATGATGGTTTTGACAATATTTCATTTGACTTTGATCCCAACAGATGCAACATAGAATTGCAAGAAAGAGATTTGCATTCAATATTTTGTACATAG 1185 0.3654 MAMLIENEVMCLGKSQRFMEGKEVIKGARCVKRQRREHAAAPKIGDEGNKMPQQQVGENSTTNTSKRSSRFRGVSRHRWTGRFEAHLWDKLSWNATQKKKGKQDEKLYVSNIVGAYDEEVSAARAYDLAALKYWGTSTFTNFPISDYEKEIEIMNTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFELSSYIKWLKPESITEAKHESQILQKEFQNVTSPNNSTLLQESKLLALQKSFFIPNDLNSTENQESSLENKNNHFLSNKSTSPTALSLLLRSSLFRELLEKNSNVAEDEVTKEQQQITSDDELGGIFYDGFDNISFDFDPNRCNIELQERDLHSIFCT 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00112 394 SUPERFAMILY DNA-binding domain 178 238 IPR016177 GO:0003677
Mepo3g00112 394 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 43 302 - -
Mepo3g00112 394 ProSiteProfiles AP2/ERF domain profile. 179 237 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 SUPERFAMILY DNA-binding domain 69 145 IPR016177 GO:0003677
Mepo3g00112 394 Gene3D AP2/ERF domain 178 239 IPR036955 GO:0003700|GO:0006355
Mepo3g00112 394 Gene3D AP2/ERF domain 69 145 IPR036955 GO:0003700|GO:0006355
Mepo3g00112 394 MobiDBLite consensus disorder prediction 36 73 - -
Mepo3g00112 394 SMART rav1_2 179 243 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 SMART rav1_2 70 149 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 ProSiteProfiles AP2/ERF domain profile. 70 143 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 CDD AP2 178 239 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 Coils Coil 332 352 - -
Mepo3g00112 394 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 PRINTS Ethylene responsive element binding protein signature 219 239 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 CDD AP2 69 145 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 FunFam AP2-like ethylene-responsive transcription factor 178 239 - -
Mepo3g00112 394 MobiDBLite consensus disorder prediction 52 69 - -
Mepo3g00112 394 Pfam AP2 domain 178 229 IPR001471 GO:0003700|GO:0006355
Mepo3g00112 394 Pfam AP2 domain 69 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00112 Mepo-Chr3 1530727 1533293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00112 66 241 AP2-EREBP Transcription Factor Family AT5G57390 65.909 2.82e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo3g00112 AP2 2.2e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00112 - - gmx:100792612 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g00112 3 1530727 1533293 Mepo3g00112 3 1530727 1533293 ECH