Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00105 ATGGGGTTTAGGAATAATGCAATTCAAGCAGGGAGTTTGGATGTGGGAGGGAAGTCAAAGGGAAAGATGAAGAAAGATTGTGATGAGAAGGAAATTGGTTGTTGTGTTAAATTTAGTTGCTTTGGAAAGTGTATACCTTCAAGATTAAAGGTTGATAGTTCCAAAAGTGGTACCACAAGTGCTCATAATGTAGAAAATGCATCTGCGTCTGAGAGAAGAAAAAAGGAAAAAAGTGCTCCTCCAGGATCCTCTACAACTAGTAATGCAGAAAGTATCCCTTCCACTCCAATGTTCAGTGAAGAGTTGAAGGTTTCTTCTGATTTGAGAAAGTTCACATTCAATGAGCTAAAGATGGCAACTAGGAATTTCCGACCCGAGAGTCTTCTTGGTGAGGGAGGATTCGGTTGTGTGTTCAAAGGTTGGATTGAGGAGAATGGAACTGCACCGGTGAAACCAGGTACTGGACTTACCGTCGCAGTCAAGACCCTCAACCATGATGGACTTCAAGGTCACAAAGAGTGGCTTGCTGAGTTAAACATTCTCGGTGATATCGTCCACCCGAATTTAGTCAAATTGATTGGCTTCTGTATTGAAGATGATCAAAGATTATTGGTTTATCAGTTTATGCCGCGTGGAAGTTTGGAAAACCATCTTTTCAGAAAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCGCTTGGTGCAGCAAAAGGTCTGCATTTTCTTCACGAAGAAGCTCAAAGGCCAATAATCTATCGCGATTTCAAGACTTCTAATATTTTATTAGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTCAAGGGGAAAATACACACATATCAACAAGAGTTATGGGAACATATGGTTATGCAGCTCCTGAATATGTGATGACTGGTCATTTGACATCAAAGAGCGATGTCTATAGTTTTGGAGTAGTACTACTTGAAATGCTCACTGGACGGCGAGCTGTTGATAAAAATAGACCAAACGGTGAACACAATCTTGTGGAATGGGCGAGACCTGTACTTGGAGAACGAAGATTGTTATTCCAGATAATTGATCCTCGTCTCGAAGGTCACTTCTCTGTCAAAGGGGCACAGAAAGCCGCCCAACTAGCTGCCCAATGCCTTAACCGTGATCCGAAAGCCAGACCTATGATGAGTGAAGTTGTTCAAGCTCTAAAGCCTTTGCAAAACCTCAAAGATATGGCTATCGCGTCATATCACTTTCAAGTGGTGCGAGTAGATCGTACAATGTCAATGCCGAATTCTAAAAATGGCACACAAACACAGGTAGCATCTTTATCGAAGAAGGGTCAACCTATGAGGATCTTGTCAAGTCCAAATGGTCAACATGGCTCTCCGTACCGTCATTATATCAAGTCACCAAAACCTAAAAATGGATAA 1437 0.4189 MGFRNNAIQAGSLDVGGKSKGKMKKDCDEKEIGCCVKFSCFGKCIPSRLKVDSSKSGTTSAHNVENASASERRKKEKSAPPGSSTTSNAESIPSTPMFSEELKVSSDLRKFTFNELKMATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNILGDIVHPNLVKLIGFCIEDDQRLLVYQFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLHFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPQGENTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAVDKNRPNGEHNLVEWARPVLGERRLLFQIIDPRLEGHFSVKGAQKAAQLAAQCLNRDPKARPMMSEVVQALKPLQNLKDMAIASYHFQVVRVDRTMSMPNSKNGTQTQVASLSKKGQPMRILSSPNGQHGSPYRHYIKSPKPKNG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00105 478 MobiDBLite consensus disorder prediction 51 66 - -
Mepo3g00105 478 MobiDBLite consensus disorder prediction 50 96 - -
Mepo3g00105 478 Pfam Protein kinase domain 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00105 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Mepo3g00105 478 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Mepo3g00105 478 Gene3D Phosphorylase Kinase; domain 1 103 208 - -
Mepo3g00105 478 PANTHER OS01G0588500 PROTEIN-RELATED 76 408 - -
Mepo3g00105 478 MobiDBLite consensus disorder prediction 80 96 - -
Mepo3g00105 478 Gene3D Transferase(Phosphotransferase) domain 1 209 425 - -
Mepo3g00105 478 MobiDBLite consensus disorder prediction 429 463 - -
Mepo3g00105 478 CDD STKc_IRAK 129 407 - -
Mepo3g00105 478 MobiDBLite consensus disorder prediction 429 478 - -
Mepo3g00105 478 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g00105 478 FunFam Probable serine/threonine-protein kinase PBL8 209 423 - -
Mepo3g00105 478 ProSiteProfiles Protein kinase domain profile. 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00105 478 FunFam Serine/threonine-protein kinase BIK1 90 208 - -
Mepo3g00105 478 SUPERFAMILY Protein kinase-like (PK-like) 104 404 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00105 Mepo-Chr3 1496314 1501379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00105 99 420 Glycoside Hydrolase AT3G07070 52.761 5.24e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo3g00105 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00105 - - gmx:100305393 833.172