Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00079 ATGCGGATGAGTTGTAACGGTTGTAGAGTACTAAGAAAAGGTTGCAGTGAAAACTGTAGCATAAGACCTTGTTTGCAATGGATCAAAAGCCCTGAATCACAAGCTAATGCCACCGTGTTTCTTGCAAAATTCTACGGTCGTGCCGGTCTCATGAACCTTGTTAACGCCGGTCCCGAACATCTTCGTCCAGCAATTTTTCGTTCGTTGTTGTACGAAGCATGTGGTCGAATAGTGAACCCAATTTACGGTTCAGTCGGTTTATTATGGTCCGGAAGCTGGCAGCTATGTCAAGCCGCGGTGGAAGCCGTTTTAAAAGGTGCACCGATCACACCAATAACTTCGGAAGCAGCTGCTAACGGGAGGGGCCCACCACTCAAAGCCTATGACATCCGCCATGTGTCGAAGGAGGAAAACTCGGCCGCGTCTACCGAGTTAACTCAACAACGAGTTAAGACTCGGTCGCGTAAGCGGTCGAGTTTAGCCAAGCCGAAAATACAAGAGGAAAAGAGTAGTAATGATAACAAGGGATTTGAATCCGGTTCAACTGAGCCGACTGGTTCGGTTGAACCGGTTGAAGAGGTGATGAACCGGTCAGCGAGTCATGAGTCGTCGATTAGCCACCAGTCTGAGGCGGTTGCGGTGGTGGATGGAGAGAGTAAAGATAGTGAGAGTGAAACTTCGATGATCTTATTTAGAGATGAACCGGAGTTGGACCGGAAAATGAAGCCGGCTGATCGAACCGGTGAGTGTGGAGAGGAAAAGGTTGGTTTGGAGCTGACTCTTGGGCTTGAACCGGTTTCACGTGTTTATCATGTGGTTCCTGTGAAGAAAAGAAGAGTTGTATTGAAGGATTGTGGTGTTGGCTCATGGAATGTGGAGTTAGGGCTTCAATATCCGGCTTAG 903 0.4828 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKEENSAASTELTQQRVKTRSRKRSSLAKPKIQEEKSSNDNKGFESGSTEPTGSVEPVEEVMNRSASHESSISHQSEAVAVVDGESKDSESETSMILFRDEPELDRKMKPADRTGECGEEKVGLELTLGLEPVSRVYHVVPVKKRRVVLKDCGVGSWNVELGLQYPA 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00079 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 202 - -
Mepo3g00079 300 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Mepo3g00079 300 MobiDBLite consensus disorder prediction 160 174 - -
Mepo3g00079 300 MobiDBLite consensus disorder prediction 136 226 - -
Mepo3g00079 300 PIRSF AS2 1 296 IPR017414 -
Mepo3g00079 300 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00079 Mepo-Chr3 1184987 1186864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00079 1 280 AS2 family AT3G02550 60.211 5.78e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g00079 LOB 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00079 - - lja:Lj1g3v3317390.1 407.142