Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00043 ATGGATAAAGAAAATAACACACGTGCAAAAAAAAAAGAAGTTAACAATAGCAGCTCCTCTAAGGTGGAGATAATGTGCTTAGAGAAGAGTTGTAGGGTGTGCCGTTGTGCTGAGTCTGACAAACAAGGAGATGCTGCCTTGGAATATACGGGTATCACCTCAGTTATAGATGCCAACTCTGAAAGTGAATCCGAGATAATGGAATTTGTTGGACCTGATGGAGAGATTTTTGAATGTAAGAATTGTTTGGAGATTGTTGTGTCCCATGAAGATACATTGATTCCATTTGGTGGTAGCTGTAAAGATGAACTTACTATGGTACACTATGCTTGTGCTCTCAAATGGTTTGCCCATCTTGGATCTTCCATTTGTGAAATATGTGAAAATGTGGCGATTAATATTAGAACATCTGATGTCAAGAAAGTTGTTGATTGTTTGAAGATGCATGAAGCACTAAGAGAAAGTGCACTTAATGGAGATCCTGTTCCTGCACAAGATCAGCTAACTGATGTCGTGGCTGCTATCCGGAGGCAAAAATTGACTGAAATTGCAAGGTGGTTTACTATTCTTGATAGTAGTAGTGATGTGGACTCAATTTTGGAGATTGTTTCCGATCATCCTTTGAATAACGTTGTCAAAGAAGCTGGCCTTGTACAGAACCGTACAACTAACCGGGGTGCAAAAGTTATAGGTGTTTTACTTGCAGCATGA 711 0.3952 MDKENNTRAKKKEVNNSSSSKVEIMCLEKSCRVCRCAESDKQGDAALEYTGITSVIDANSESESEIMEFVGPDGEIFECKNCLEIVVSHEDTLIPFGGSCKDELTMVHYACALKWFAHLGSSICEICENVAINIRTSDVKKVVDCLKMHEALRESALNGDPVPAQDQLTDVVAAIRRQKLTEIARWFTILDSSSDVDSILEIVSDHPLNNVVKEAGLVQNRTTNRGAKVIGVLLAA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00043 236 SMART ringv_2 78 128 IPR011016 GO:0008270
Mepo3g00043 236 SUPERFAMILY RING/U-box 98 130 - -
Mepo3g00043 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 130 IPR013083 -
Mepo3g00043 236 PANTHER ZINC FINGER, RING-CH-TYPE 12 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00043 Mepo-Chr3 613494 614204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00043 30 235 C3H Transcription Factor Family AT5G08750 39.583 1.87e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00043 - - gmx:100805323 196.052