Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00034 ATGGGTGATGAAAGTGGTGGTTTGAGTGCTAATAAAGGTGTTGCTCAAGAGGATGAGGGCAATACTACCCCTTTTCCTGAGAGGGTTCAAGTAGGAGGTTCGCCTATGTTCAAAGTGGAGAGGAAACTTGGCAAAGGTGGATTTGGACAGGTTTTTGTTGGTCGTCGAGTTACCGGTGGTAATGACCGCCTTAATGGCCCCGGTGCCACTGAGGTGGCTTTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTACGGCCCTCCTTACGAGTGGCAAGTGTACAACACCCTTGGTGGAAGTCATGGAATACCTAAAGTACATTATAAAGGAAGACAAGGAGAATATTACGTGATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATACCACAGGCCAGGCGATGTCTGCCGAAATGGTGGCATGCATTGCTGTGGAGTCATTGTCGATCTTGGAGAAGATGCACTCAAGGGGATATGTGCATGGGGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCAGGTACAGCACAAGAGAAGAAATTGTTTCTTGTTGATCTCGGATTAGCAACAAAGTGGAGAGACACCTCCACTGGGCAGCATGTTGAATATGACCAGCGCCCTGATATGTTCAGAGGAACTGTTCGATATGCAAGTGTTCATGCTCATTTAGGAAGAACTGCTAGTAGAAGAGATGATCTTGAATCTCTTGCATATACACTAATTTTTCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGAGATAATAAGTCGTATCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGCTTCTGCCCTACTCCTTTCAGACATTTCCTTGAGTTTGTAGTGAACATGAAATTCGATGAAGAGCCTAATTATTCCAAGCTAATATCCTTGTTTGATAGTGTGCTTGGACCAAATCCTGCACTGCGGCCAATTAATACTGAAGGTGCTCAAAAGGTCGGGCAAAAGAGAAGTAGATTGAATATTGAGGAAGAAGATGATTCACAGCCTAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATATCAATTTACAATGCAAGAATGCCAATGAAGCAAAGGTATCATTACAATGTAGCAGATGGACGATTAGCGCAACATGTAGAGCGAGGGATTGCAGACGGCCTTCTTATTAGTTGCGTGGCTTCTTGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGATTTACAAATCAAGTCTACAAGTTGTCACCTTTTTTCTTACACAAGGAATGGATCATGGAGCAATGGGAGAAGAACTATTACATTACTTCTATAGCCGGGGTTACTAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGCACACAGTATACACAACAGTCATACAAAGTAAGCGAGTCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCACGTGACTTCAATGGCCACTGCTGGAAGTCGTTGGGGTGTTGTTATGTCACGGAATGCTGGATTCAGTGATCAGGTCGTTGAACTTGATTTCCTCTACCCTAGTGAAGGAATCCATAGACGATGGGATAATGGTTACAGGATCACAGCAACTGCAGCTACATGGGATCAATCTGCTCTTATATTAAGCAAACCCAGGCGAAGACCTGCTGACGAAACTCAGGAAACTCTTCGGACATCTCAATTTCCAAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCTTGTTTGTGCTATGGGCGTACAGTATGTTGA 1800 0.4356 MGDESGGLSANKGVAQEDEGNTTPFPERVQVGGSPMFKVERKLGKGGFGQVFVGRRVTGGNDRLNGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNTTGQAMSAEMVACIAVESLSILEKMHSRGYVHGDVKPENFLLGQPGTAQEKKLFLVDLGLATKWRDTSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSYLVCKKKMGTSPEMLCCFCPTPFRHFLEFVVNMKFDEEPNYSKLISLFDSVLGPNPALRPINTEGAQKVGQKRSRLNIEEEDDSQPKKKVRLGVPATQWISIYNARMPMKQRYHYNVADGRLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFTNQVYKLSPFFLHKEWIMEQWEKNYYITSIAGVTNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSKPRRRPADETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00034 599 PANTHER CASEIN KINASE-RELATED 37 567 - -
Mepo3g00034 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mepo3g00034 599 MobiDBLite consensus disorder prediction 329 351 - -
Mepo3g00034 599 ProSiteProfiles Protein kinase domain profile. 37 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00034 599 SUPERFAMILY Protein kinase-like (PK-like) 37 320 IPR011009 -
Mepo3g00034 599 MobiDBLite consensus disorder prediction 337 351 - -
Mepo3g00034 599 Pfam Protein kinase domain 37 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g00034 599 FunFam casein kinase 1-like protein HD16 10 355 - -
Mepo3g00034 599 CDD STKc_CK1 36 312 - -
Mepo3g00034 599 Gene3D Transferase(Phosphotransferase) domain 1 11 359 - -
Mepo3g00034 599 MobiDBLite consensus disorder prediction 1 32 - -
Mepo3g00034 599 ProSitePatterns Protein kinases ATP-binding region signature. 43 75 IPR017441 GO:0005524
Mepo3g00034 599 SMART serkin_6 37 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00034 Mepo-Chr3 507853 516232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00034 155 317 MAP Kinase Kinase Kinase AT5G50180 25.455 1.46e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mepo3g00034 Pkinase 5e-17 CL0016