Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00032 ATGTCTTCTTCTTCATCTCCTTCTCATGATCATGAACCAAAAACCAATGAAGTAGTTTATCATCGGTCCCTTCAAAACTCCCGATACCCTTCTTTCCATTTTCTTGATTATTCAAACCCTATTCAGAATGAACTCAAAAACCCATCTTCAACAACTAATGATGCTGCAAAACAACAGAACAACACGAAGAAGAAGATCATATGGTTTTTTTCTTATTCTGTTACTAGTAATCATAAGGATGATGAAAAACAGAACAAACATACATACTCATGTGATGTTTGCAACAAGGTTTTTACTTCTAACAAAGCATTGAATGGACATAAGATATGTCACACTCAAGAGGGTGTTATTCACCCACAAACTGCATCACCATCTTCCTTTGAACAGAAGCATATTGACTGTTCAAAGTACTTGCCGCCAATATCCTTCAAAACCAAGAAACGGCAGCGGCGCAGGAGAAGATATATGAATATTGATGATGATGTGATTGCTGCTGAAACTTTGTTGCATATATCTTGCGGAGGTTATGAGGGATCATCTGCCAATATCGATGTGAATCACCGTGGTGCTAAAAGCCAAAAACTTTCTTGCAATATGATGAATGATGATGAGAAGAAGAAGAAGAAGGAACAAGGTGTGTTGCTAACAAGTGGTGATATTGATGAAACATTGAAAGATGATAGCCACAATGAAAAGAAATTGGTGTTGAGGTTCAAGATTCCTAAAGGCAAGATTTTTCAAACATCACAAGATTGCAAGGAACTTCCTAGCTCTAATCATGGTATTGAAGAGAAGAAGATTAATGAAGGTGTTACTGAATTAGGGTCAAAAGTTGTGAAGAATTTTGATTTGAACGAGCTTCCAAGTGATGATTTTGAAGATGAAACTAATTAG 894 0.3635 MSSSSSPSHDHEPKTNEVVYHRSLQNSRYPSFHFLDYSNPIQNELKNPSSTTNDAAKQQNNTKKKIIWFFSYSVTSNHKDDEKQNKHTYSCDVCNKVFTSNKALNGHKICHTQEGVIHPQTASPSSFEQKHIDCSKYLPPISFKTKKRQRRRRRYMNIDDDVIAAETLLHISCGGYEGSSANIDVNHRGAKSQKLSCNMMNDDEKKKKKEQGVLLTSGDIDETLKDDSHNEKKLVLRFKIPKGKIFQTSQDCKELPSSNHGIEEKKINEGVTELGSKVVKNFDLNELPSDDFEDETN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00032 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Mepo3g00032 297 Gene3D Classic Zinc Finger 87 115 - -
Mepo3g00032 297 Pfam C2H2-type zinc finger 89 113 - -
Mepo3g00032 297 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 33 293 IPR044653 GO:0003700
Mepo3g00032 297 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Mepo3g00032 297 SMART c2h2final6 89 111 IPR013087 -
Mepo3g00032 297 SUPERFAMILY beta-beta-alpha zinc fingers 85 115 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00032 Mepo-Chr3 481197 482090 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g00032 zf-C2H2_6 4.5e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00032 - K09228 cam:101497742 79.3369