Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g00029 ATGGCTTCATCTTTGGAGCAGCTTCTTGCAGAGGAAGGGTTCAAAGCAAGCAGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCACCATGGTAATTCAAGTGATCCTCTTCACTCTTTGGAAGATAGACTGTGTGTATCATCAAGTGAAAGAATTAAAACACAGAAAACAAAGTCTAAAACAGCCTCAAGATATCAGATTAGCAACACAAGTGACAACAAAAACATGAGATCAAGTGATAATGATGTTTTTATAGGAAACAAGTTAAATAACGAACGGTTGAAGAACAATGAATCTGAGAAGAACAAGTCTTACAATTCATCAGATAGTGATAGTGGATTTGAAGATGCTTATTCAAACCAAGTGTCTAATGTGACAAGAGGCAAAGAAAAGAAGGAACAACTGGGGGAAAAGCCATTGAAGGATTCATATATGCTTAGACAATTAAGTGGAAATAGAAAGAATATAAAACATCAAGAAAAATCATACTCTAGATCAAATAGTAATAGCAAAAACTATGAAGATAGCAAGAACAAAAATAGCAATCATGCTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCTGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTTCTAAAGGATGAAGATTTTCGGTCGGCGTTGCGCCACAATTGTTTCTCCTCATTGAATTTCATTCAACTTGAGGAAGAACGCAATTCTGAGACCAAGGTGATTACAAGTCTTGAGCAAGCAATTGAATGCATAGAAAAAACTGCTGCTGAGGAATCTATATCTGTAATACATCTTAAAAGAGCAACAATGCAGCTTAGCATTATTACTGGTTTGAGTTTGAATGATCTCAAGTATGACTTTACGTGCGGGATTCAAAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATCCAAAGAAAAAAGAAAGTTTCGGCGAAGCATCTTTTGCAAGTGTTTTGCGACTCTCCTTTTCAGGCACGGACGATATTGTTGCCTGAACTTTGGGAGCGTCTATTTTCTTCGCAACTTTCTGATTTGAAGAAATGGTATAACAACAAGGAAGGTGAAATTGTTTTAGATACACAAAACAAAGCAAGAAAGATAAAGATTCTCCAGAAAGTGTATAATGAAAATTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCCATTGGCATTCCATCATTATCCATTACGAGTCGACAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTTCTAGCTCCAATGAACCATTCTCGCCACAGGCAATGGTCAGCAAAAAACTTTATGATTCTTTCTTTGGCAGTAAACCTCAAGTCTATGAAGTTGATGAGGATGAAGATAGCTTTGAAAACTGTGAGAGAGGTTCTTATGGTTCGACCATCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATTGATCAAAGTACTGAAGAGTTCACTCCAAGAGTACCAGTTCATGAATTCTATATACCTCGGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGATAGAAATTCCAGAAATGCCACTAGAAAATATTTCTCCATAGAAACTAATTTAAACAGTCACATATTTAATGATCTACCACATGAAAAAGCAAATGAAATTTCTATCAAAAAGATGCAGCCAAATAAGATAACCTCTACTATTGATGGATCATATTCTCCAAGCATACCACAGGAATTTATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCGGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCAGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTTGCCTCTCAAACGGTGGAGAATTCGAAGGAAATTAAGTTGAAAAAGCGTGACGAGGCAATCATTTTCAAGTTACAAGGTCTTTTCTCTTCCTTGAAAGAAGAGGAAAAATCAACTTATGCTATGCATATAATCTCTTTAGGGGTTCTTTCATTTCTCTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCACATGTGATGGAGATCTTGTTAAATTGTATACAATCAGATTCTAGTTGCATATATAAGATAGCAAGAGGTGTCAACAGAAAATTTCTTCTTGAGCTTCTTCACAGTAAGGATGTTACCCCGACAAAAAATGCAATACTATTCCTTACTGAACTTTTATCAATGAAGAGAAGAAAGGATGTCACTTCTTTCATAGGTGGCTTGGTGGGTGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGTATCTCAAGAATTCTTCTCCAATTGAAAAGCCCCTCATCGCTGTCCTCTTATTACACTTTGAACTACTGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAATGCCATTGCAGAGGCACTTGATGCCAGCTTAAATGATGACAAGGTTCAAAAGAAGTGTTGCAGAGCTATTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAAATAACACTAGCATCTTAAAGCAAGCAGGTTATAATAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGAAGAGGATCAACGGTTAAATGTAACCATTTCATCGGAAGATGAAGAAGAAGAAATGGATGAAGAGTTCATGGCAAACTTGTTAGAATCAATGATTGGTGATGGAGAAAAATGCAGAACACTTTTGAAGATTATGGCAGACGATATTGCTCCCCTTCTTCATGGACTAGTTGATGTATTATGGACTGCTAAGAAACTGCATGCCATTTTGTATAGGGAGAATCTGTAG 2979 0.3625 MASSLEQLLAEEGFKASSRKVQRSRSSFHHGNSSDPLHSLEDRLCVSSSERIKTQKTKSKTASRYQISNTSDNKNMRSSDNDVFIGNKLNNERLKNNESEKNKSYNSSDSDSGFEDAYSNQVSNVTRGKEKKEQLGEKPLKDSYMLRQLSGNRKNIKHQEKSYSRSNSNSKNYEDSKNKNSNHAMQLQDASSLAIDEIAVKALVSILNGYIESFLKDEDFRSALRHNCFSSLNFIQLEEERNSETKVITSLEQAIECIEKTAAEESISVIHLKRATMQLSIITGLSLNDLKYDFTCGIQNFKLSACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARTILLPELWERLFSSQLSDLKKWYNNKEGEIVLDTQNKARKIKILQKVYNENLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSITSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFGSKPQVYEVDEDEDSFENCERGSYGSTIVKKTLIYESETVKYIDQSTEEFTPRVPVHEFYIPRKGTSRTAAEEWKDRNSRNATRKYFSIETNLNSHIFNDLPHEKANEISIKKMQPNKITSTIDGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDRLLDFASQTVENSKEIKLKKRDEAIIFKLQGLFSSLKEEEKSTYAMHIISLGVLSFLCRRFEQGNLEEKSHVMEILLNCIQSDSSCIYKIARGVNRKFLLELLHSKDVTPTKNAILFLTELLSMKRRKDVTSFIGGLVGEDVVSTMHIVLMYLKNSSPIEKPLIAVLLLHFELLVEQPQKFSIYIEMAVNAIAEALDASLNDDKVQKKCCRAILILCGHFSSTGMITNNTSILKQAGYNNGSSELKSPSLDEEDQRLNVTISSEDEEEEMDEEFMANLLESMIGDGEKCRTLLKIMADDIAPLLHGLVDVLWTAKKLHAILYRENL 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g00029 992 MobiDBLite consensus disorder prediction 126 140 - -
Mepo3g00029 992 CDD RING-Ubox_PUB 594 642 IPR045210 -
Mepo3g00029 992 PANTHER OS04G0584500 PROTEIN 1 575 - -
Mepo3g00029 992 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 592 665 IPR013083 -
Mepo3g00029 992 MobiDBLite consensus disorder prediction 106 125 - -
Mepo3g00029 992 ProSiteProfiles U-box domain profile. 592 667 IPR003613 GO:0004842|GO:0016567
Mepo3g00029 992 MobiDBLite consensus disorder prediction 14 185 - -
Mepo3g00029 992 SMART Ubox_2 596 660 IPR003613 GO:0004842|GO:0016567
Mepo3g00029 992 Pfam U-box domain 593 663 IPR003613 GO:0004842|GO:0016567
Mepo3g00029 992 SUPERFAMILY RING/U-box 589 663 - -
Mepo3g00029 992 SUPERFAMILY ARM repeat 709 886 IPR016024 -
Mepo3g00029 992 Coils Coil 989 992 - -
Mepo3g00029 992 MobiDBLite consensus disorder prediction 162 185 - -
Mepo3g00029 992 MobiDBLite consensus disorder prediction 59 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g00029 Mepo-Chr3 431014 436211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g00029 581 716 U-box Gene Family AT5G42340 32.117 2.85e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g00029 - - gmx:100820501 1124