Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo34g00021 ATGGGGAGTCCAGAATTTCCAGATCTAGGAAAACACTGCGCTGACTCCGATTGCAAGCTCGTTGATTTCTTGCCCTTCACTTGCGATCGTTGCTCTCAGGTGTATTGTTTGGAACACCGAAGTTATATCAAACATCGGTGTACAAAAGCTGACAAGCAAGATGTCACTGTAGTAATATGTCCACTCTGCGCTAAAGGAGTCCGCCTAGTTCCTGAGCAAGATCCAAACATAACATGGGAGAATCATGTTAACACCGACTGTGACCCATCAAATTATGAGAAAGTTACAAAGAAGAAAAAATGCCCTGCAGCTGGATGCAAAGAGATCTTAGTATTCTCAAACACAATTAAATGCAGGGATTGCACGATAGACCATTGTTTGAAGCATAGGTTTGGTCCTGATCACAAATGTCCAGGACCTAAAAAAGTGGAAACAAATTTCCCTTTTATGAATCTAATGAATAGGAGTAGAAAAAAGGAGTCTAAAACCAACTCAAGTTCAACCTCCTCTTCATCTAAATGGACTACAAGCTTTCTTAATGCTGCTTCTAGTATTCGAGCTTCAGCTGAGGCTGGAATGTCAAAGTTGAGTGGTGAAATTAACCAAGCATGGGGGACATCAAGCGATGGTGGGAGAAAGAGCAACGGCAGTGGTCAAGTGGAGCAATGCCCTCAATGTGGTGCCAAGTTTTCCTCAATCACTACTTTAATCGATCATGTGCAGAAAGTTCATGAGAGAAGTGGCAGCCGATCTGCTGCGAATGTTACCATTGATGCGTGTCCTAAGTGTAGTAAAGGATTCACAGATCCCGTGTCCCTTGTGGAGCATGTTGAGAGGGAACATGGTGGCACTTCTAGAACATAG 864 0.4329 MGSPEFPDLGKHCADSDCKLVDFLPFTCDRCSQVYCLEHRSYIKHRCTKADKQDVTVVICPLCAKGVRLVPEQDPNITWENHVNTDCDPSNYEKVTKKKKCPAAGCKEILVFSNTIKCRDCTIDHCLKHRFGPDHKCPGPKKVETNFPFMNLMNRSRKKESKTNSSSTSSSSKWTTSFLNAASSIRASAEAGMSKLSGEINQAWGTSSDGGRKSNGSGQVEQCPQCGAKFSSITTLIDHVQKVHERSGSRSAANVTIDACPKCSKGFTDPVSLVEHVEREHGGTSRT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo34g00021 287 Pfam C2H2-type zinc finger 222 244 - -
Mepo34g00021 287 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Mepo34g00021 287 MobiDBLite consensus disorder prediction 148 173 - -
Mepo34g00021 287 ProSitePatterns Zinc finger C2H2 type domain signature. 260 281 IPR013087 -
Mepo34g00021 287 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 249 - -
Mepo34g00021 287 SMART c2h2final6 221 244 IPR013087 -
Mepo34g00021 287 SMART c2h2final6 258 281 IPR013087 -
Mepo34g00021 287 SUPERFAMILY AN1-like Zinc finger 4 59 IPR035896 -
Mepo34g00021 287 Gene3D - 2 60 IPR035896 -
Mepo34g00021 287 MobiDBLite consensus disorder prediction 201 220 - -
Mepo34g00021 287 Gene3D - 80 155 IPR035896 -
Mepo34g00021 287 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Mepo34g00021 287 Pfam AN1-like Zinc finger 13 52 IPR000058 GO:0008270
Mepo34g00021 287 Pfam AN1-like Zinc finger 101 141 IPR000058 GO:0008270
Mepo34g00021 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 258 286 IPR013087 -
Mepo34g00021 287 SUPERFAMILY beta-beta-alpha zinc fingers 222 277 IPR036236 -
Mepo34g00021 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 221 249 IPR013087 -
Mepo34g00021 287 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Mepo34g00021 287 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Mepo34g00021 287 Gene3D Classic Zinc Finger 196 284 - -
Mepo34g00021 287 SUPERFAMILY AN1-like Zinc finger 93 147 IPR035896 -
Mepo34g00021 287 FunFam AN1-type zinc finger protein 2B isoform X1 3 64 - -
Mepo34g00021 287 ProSitePatterns Zinc finger C2H2 type domain signature. 223 244 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo34g00021 1 286 C2H2 Transcription Factor Family AT2G41835 62.021 8.08e-129 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo34g00021 zf-AN1 9.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo34g00021 - - gmx:100786272 482.256