Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo33g00041 ATGAGTGCTACAGATGGTCTAAAGAGAGGAATGGGTGTGATTGACACGGGAACTCCCCTCAGTGTTCCAGTCGGCGGAGCAACCCTAGGTCGAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTAGGTCCTGTAGATACTGGCACAACATCTCCTATTCATAGATCCGAGCCTGCCTTTATACAGTTAGATACAAAATTAGCCATTTTTGAAACAGGAATTAAAGTAGTAGATCTTTTAGCTCCTTATCGCCGTGGCGGAAAAATAGGACTTTTCAGTGGAGCTGGGGTAGGTAAAACAGTACTGATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCCGTATTTGGCGGAGTAGGTGAGCGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAAATATTGCGGAATCAAAAGTAGCTCTAGTCTACGGGCAAATGAATGAACCACCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCCGTTTTGTCCAAGCCGGATCCGAAGTATCTGCCCTATTGGGTCGAATGCCTTCCACTGTGGGTTATCAACCCACCCTGGGTACTGAAATGGGTACTTTACAAGAACGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGATCCTGCTCCTGCCACGACATTTGCACATTTGGATGCTACTACTGTACTATCGAGAGGGTTAGCTTCCAAAGGTATCTATCCAGCAGTCGATCCTTTAGATTCAACGTCAACCATGCTCCAACCTCGGATCGTTGGTGAAGAACATTATGAAACTGCGCAAAGGGTTAAACAAACGTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATTCTTGGGTTGGACGAATTATCCGAAGAGGATCGTTTAACCGTAGCAAGAGCACGAAAAATTGAACGTTTCTTATCCCAACCTTTTTTCGTAGCAGAAGTATTTACAGGTTCCCCAGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGATAGTCTTCTTGAACAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCTACAGCGAAGGCTGCGAACTTGTAA 1239 0.4221 MSATDGLKRGMGVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTSPIHRSEPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFSGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSTVGYQPTLGTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLLEQAFYLVGNIDEATAKAANL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo33g00041 412 Gene3D - 20 296 IPR027417 -
Mepo33g00041 412 CDD F1-ATPase_beta_CD 21 299 - -
Mepo33g00041 412 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 74 294 IPR000194 GO:0005524
Mepo33g00041 412 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 297 410 - -
Mepo33g00041 412 CDD ATP-synt_F1_beta_C 301 408 - -
Mepo33g00041 412 FunFam ATP synthase subunit beta 297 412 - -
Mepo33g00041 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 299 IPR027417 -
Mepo33g00041 412 FunFam ATP synthase subunit beta 1 346 - -
Mepo33g00041 412 PANTHER ATP SYNTHASE 1 412 - -
Mepo33g00041 412 Gene3D - 297 412 IPR024034 -
Mepo33g00041 412 ProSitePatterns ATP synthase alpha and beta subunits signature. 285 294 IPR020003 GO:0005524
Mepo33g00041 412 Hamap ATP synthase subunit beta [atpB]. 1 412 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mepo33g00041 412 FunFam ATP synthase subunit beta 20 296 - -
Mepo33g00041 412 NCBIfam F0F1 ATP synthase subunit beta 1 412 IPR005722 GO:0015986|GO:0045261|GO:0046933
Mepo33g00041 412 SMART AAA_5 86 278 IPR003593 GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo33g00041 16 351 Primary Pumps ATPases(2) AT1G20260 27.596 5.53e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo33g00041 K02112 - mnt:24286633 770.385