LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo33g00033	ATGAAAATGGGATTAGGTGGTGAGAATGGTAAGGTGATTGAGTCTTCGGATGTGTGTAAATCAAAAGGGTGGAAAAAGAAGAAGAAACAAGATGGGGTTATGGAAGATGAAGAAACTGAAACTGGGTGTTGGCTTAGTTTTAGGTTCATTGGAAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCTGTTAGTGGCACCAGTACTAATTATGCTGAAAGCAAATCCACTCTTGATACAAGTAGAGACCAACCATCGGTTCCAGTAGTCTCTTCAACAACCACTACCACTAGTAATGCTGAAAGCAACTCATCTACTTCAAAAGTTGAAGACGAAATTAAAGTTGCTTCCAGGCTGCGGAAATTCTCTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCCGAGAGTCTTCTCGGTGAAGGTGGGTTTGGTTGTGTGTTCAAAGGATGGATCGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGACTTACTGTTGCAGTCAAAACCCTTAACCATGACGGCCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTATCTTGGTGATTTAGTTCATCAAAACCTTGTCAAACTTATAGGCTACTGTATCGAAGATGATCAAAGGTTGCTAGTATATGAATTTATGCCTCGGGGAAGCTTGGAAAACCACTTGTTTAGGAGATCCTTGCCTCTTCCGTGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCAAAGGGACTTGCTTTTCTTCACGAGGAAGCCGAACGACCTGTAATATATAGGGATTTCAAAACTTCCAATATATTATTGGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTGTCTACTCGAGTTATGGGAACTTATGGTTATGCAGCTCCAGAATATGTCATGACAGGGCATCTTACATCAAGAAGTGATGTGTATAGTTTTGGAGTGGTACTACTTGAGATGATAACCGGGCGAAGATCCATGGACAAAAACCGACCGAATGGCGAACATAACCTCGTGGAATGGGCTAGACCGCATCTAGGAGAGAGAAGAAGGTTCTACAGGTTAATAGACCCTCGGCTGGAAGGCCACTTCTCGATAAAAGGAGCTCAAAAAGCCGCCCATTTGGCTGCCCACTGCCTTAGCAGAGATCCAAAAGCTAGACCACTAATGAGTGAAGTTGTAGAAGCTTTGAAGCCTCTCCCAAACCTTAAGGACATGGCTAGTTCATCATACTATTTCCAGACAATGCAAGCTGACCGTTTTAGCGCAAGTCCAAATACTCGTAACGGTAGAACACAAGGGGCATTCACGCGCAATGGACAACAACAAAGAAGTCTTTCCATATCACATGGCACTCATGCTTCTCCGTTTCATCATCAGTATCCTCAAAATTCACCAAAACCAACTGGAAAGGCACAGAGTTGA	1476	0.4329	MKMGLGGENGKVIESSDVCKSKGWKKKKKQDGVMEDEETETGCWLSFRFIGSCISSRSKVDSSVSGTSTNYAESKSTLDTSRDQPSVPVVSSTTTTTSNAESNSSTSKVEDEIKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNYLGDLVHQNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMITGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAHLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTQGAFTRNGQQQRSLSISHGTHASPFHHQYPQNSPKPTGKAQS	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo33g00033	491	ProSitePatterns	Protein kinases ATP-binding region signature.	140	172	IPR017441	GO:0005524
	Mepo33g00033	491	MobiDBLite	consensus disorder prediction	439	491	-	-
	Mepo33g00033	491	SUPERFAMILY	Protein kinase-like (PK-like)	120	437	IPR011009	-
	Mepo33g00033	491	PANTHER	OS01G0588500 PROTEIN-RELATED	98	417	-	-
	Mepo33g00033	491	Gene3D	Phosphorylase Kinase; domain 1	108	219	-	-
	Mepo33g00033	491	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	263	275	IPR008271	GO:0004672\|GO:0006468
	Mepo33g00033	491	MobiDBLite	consensus disorder prediction	58	106	-	-
	Mepo33g00033	491	FunFam	Serine/threonine-protein kinase BIK1	101	219	-	-
	Mepo33g00033	491	ProSiteProfiles	Protein kinase domain profile.	134	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo33g00033	491	Pfam	Protein tyrosine and serine/threonine kinase	138	414	IPR001245	GO:0004672\|GO:0006468
	Mepo33g00033	491	CDD	STKc_IRAK	140	417	-	-
	Mepo33g00033	491	Gene3D	Transferase(Phosphotransferase) domain 1	220	436	-	-
	Mepo33g00033	491	FunFam	Probable serine/threonine-protein kinase PBL8	220	435	-	-
	Mepo33g00033	491	MobiDBLite	consensus disorder prediction	58	110	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo33g00033	79	414	Glycoside Hydrolase	AT3G07070	54.277	3.83e-119	354

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Mepo33g00033		PK_Tyr_Ser-Thr	1.2e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo33g00033	-		-	gmx:100787127	867.84