Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo33g00028 ATGGAGGAATTAGTTCTATCATTCAATAGTTTCAACAAAGGACCCATTCCAGGTGGCATCCAAAACATGAACAAACTTCAAGAATTATATCTTATGGGCAACAACTTGGAGGGTGAAATTTCATCGCTTAACAACATGACTTCTTTGAGGGTGGTCAAATTTGGCTATAACAATTTAAATGGAAGACTACCAAATGATTTTTTCAATCAGCTTCCTCAACTTGAAAATTTTACTTTACACAACAATCAATTTGAAGGAAGCATTCCACAATCAATTGGTAACTGCACATCGTTGATAAACTTAGGTTTATCATCAAACTTTCTCACAGGTTCGATACCCGAGGAGATTGGCTATCTTGATAAACTTGATTGGCTAATATTGTTTAACAATAGCTTAAGTGGATCTATTCCTTCCAAAATCTTCAACTTGTCATCACTCACTGCTTTGATTGTTGAAAAGAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGTCTGCAATATCTACTCTTGAATGATAACAATTTTGTTGGAAATATTCCAAATAACATATTCAACTCTTCTAATCTTATTTTATTTCAATTGGATGACAACAGATTCAGTGGAACTCTACCCAATATTGCTCTTGGAGATTTAAGATTGCTTGAAACGTTTCGCATATATAACAACAATTTGACAATAGATGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATATAGAGCTATCAGGGAATCATATATCCAATCTTCCTAAGTCAATTGGAAACCTAACTTCAGAACACTTCTTTGCAGACTCATGTGGAATTGATGGTAATATTCCCCTAGAAGTTGGAAACATGACCAACTTGTTATCACTTTCTCTGGATGACAATAATATAAATGGAGCAATACCTCGTTCAGTCAAAGGGTTACAAAAACTTCAAGTATTGTATCTTAGGTACAATGGACTACAAGGATCATTTATTGAAGAGTTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAGACAATAATAAGCTCTCTGGTGTTTTACCAACATGTTTGGGAAATATGACTTCTATTATAAGGTTATACATGAGATCTAACAGTCTGAACTCTATGATACCTTCCTCTCTTTGGAGTATCATAGATATCTTAGAGGTAGATTTGTCCTATAATGCCTTCATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATAGTTTTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATCAGTTCCTTACTAACATTGCAGAATCTCTCCTTAGCAGATAATAAACTGAATGGATCAATTCCCAAATCACTTGGTCAAATGGTAAGCTTGATATCTTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTGTGTATCTTCAAAACATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACATTTCAAATATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGCGGCAATCCTCGGCTCCTAGTACCTCCATGTGGTAAGCAAGTTAAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATAGTTGTGTCAGCCATTTTGGTTGTTGCTTGCATCATAGTTTTAAAACATAATAAAAGGAGAAAGAATGAAAATACTCTTGAAAGGGGTTTGTCAACTTTTGGAGCTCCAAGAAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTAAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAGGGGAAGCTTCTTGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGTAGTTGCTCAAATCTTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAACTTTCTTACAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCATTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTATAACTCATACACAAACTTTAGCTACTATTGGATACCTTGCACCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTATACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGATCTCAATTACCTTGGAATCTTCTCAAGTAGCCAATGATGTCATAGCCTTTGATTCTCCTTCATCTGCTAGTGGTAATCCATTCAACATGTGA 2571 0.3508 MEELVLSFNSFNKGPIPGGIQNMNKLQELYLMGNNLEGEISSLNNMTSLRVVKFGYNNLNGRLPNDFFNQLPQLENFTLHNNQFEGSIPQSIGNCTSLINLGLSSNFLTGSIPEEIGYLDKLDWLILFNNSLSGSIPSKIFNLSSLTALIVEKNSLSGTIPSNTGYSLPSLQYLLLNDNNFVGNIPNNIFNSSNLILFQLDDNRFSGTLPNIALGDLRLLETFRIYNNNLTIDDSHQFFTSLTNCRYLKYIELSGNHISNLPKSIGNLTSEHFFADSCGIDGNIPLEVGNMTNLLSLSLDDNNINGAIPRSVKGLQKLQVLYLRYNGLQGSFIEEFCEMKSLGELYLDNNKLSGVLPTCLGNMTSIIRLYMRSNSLNSMIPSSLWSIIDILEVDLSYNAFIGNLPPEIGNLRAIIVLDLSRNQISSNIPTTISSLLTLQNLSLADNKLNGSIPKSLGQMVSLISLDLSQNMLTGVIPKSLESLVYLQNINFSYNRLQGEIPDGGHFKYFTAQSFMHNDALCGNPRLLVPPCGKQVKKWSMEKKLILKCILPIVVSAILVVACIIVLKHNKRRKNENTLERGLSTFGAPRRISYYELVQATNGLNESNFLGRGGFGSVYQGKLLDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIISSCSNLDFKALVMEFMSNGSVDKWLYSNNYCLTFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKHSNVLLDENMVAHVSDFGIAKLMDEGQSITHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFVAELSLKTWISGSLPNSIMEISITLESSQVANDVIAFDSPSSASGNPFNM 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo33g00028 856 SMART serkin_6 603 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00028 856 ProSiteProfiles Protein kinase domain profile. 603 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00028 856 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 259 - -
Mepo33g00028 856 SMART LRR_typ_2 339 362 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 71 95 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 459 482 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 411 435 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 291 314 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 168 192 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 46 70 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 242 268 IPR003591 -
Mepo33g00028 856 SMART LRR_typ_2 119 143 IPR003591 -
Mepo33g00028 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Mepo33g00028 856 FunFam Serine-threonine protein kinase plant-type 584 678 - -
Mepo33g00028 856 PANTHER OS04G0122200 PROTEIN 118 814 - -
Mepo33g00028 856 FunFam Leucine-rich repeat receptor-like protein kinase TDR 260 533 - -
Mepo33g00028 856 Gene3D Ribonuclease Inhibitor 166 213 IPR032675 -
Mepo33g00028 856 SUPERFAMILY L domain-like 4 270 - -
Mepo33g00028 856 Gene3D Ribonuclease Inhibitor 214 539 IPR032675 -
Mepo33g00028 856 Pfam Protein tyrosine and serine/threonine kinase 606 806 IPR001245 GO:0004672|GO:0006468
Mepo33g00028 856 SUPERFAMILY Protein kinase-like (PK-like) 583 817 IPR011009 -
Mepo33g00028 856 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Mepo33g00028 856 Pfam Leucine rich repeat 437 496 IPR001611 GO:0005515
Mepo33g00028 856 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Mepo33g00028 856 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 679 842 - -
Mepo33g00028 856 Gene3D Ribonuclease Inhibitor 70 165 IPR032675 -
Mepo33g00028 856 Gene3D Phosphorylase Kinase; domain 1 586 678 - -
Mepo33g00028 856 Gene3D Ribonuclease Inhibitor 1 69 IPR032675 -
Mepo33g00028 856 SUPERFAMILY L domain-like 276 524 - -
Mepo33g00028 856 Gene3D Transferase(Phosphotransferase) domain 1 679 841 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo33g00028 8 827 Receptor kinase-like Gene Family AT3G47570 37.632 4.13e-165 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo33g00028 Pkinase 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo33g00028 - K13420 mtr:25502863 1164.44