Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo33g00021 ATGGAAAGTGAGAAGGTTTATGAGGGTTCAAGTTCAAGCATGACTATTCTACTTCAAAGTCAAAAGCTTCCATGCTCTTCTGAGCTTGTCGAGTCTCTCTTGGTTCACAATCAAAGCTCAAAACCTTCTTTTCAAGGTTCCAATTCTATGGTTAATATTGTGAATGTTGGTGACATTGGAGTCAAAAGTAGTTCTTTCTTTCAAGCTTTTGAGAAAGAAGAGAACACCGATGATGTTGATGATGAGAAATATGAGGTGTGCTTGCACCAACCCGGTAAGAAAAGGAGGCTCACAAACGAACAAGTTCATTTTCTTGAAAGCAATTTTGAGATAGAAAACAAGCTTGAACCTGAAAGGAAAGTTCAACTTGCAAAGGAGCTTGGCTTGCAGCCAAGACAAGTGGCTATATGGTTCCAAAATAGGAGAGCAAGATTCAAAACAAAACAGCTAGAAAAGGACTATGGTTCATTGAAAGCTAGCTATGATTTGCTCAAAGTTGACTATGACAATCTCCATCAAGAAGTCAACAAATTAAAAGATGAGGTTAATTCTCTCAAGAAAAAATTGGTCCCAAGAGAAGAAGAGGAAAATAATTTAGTTGATAAGTCCCTTGATGATATCATTTCACAGCATAAAAGTGATGTGGTTGGTTCAGAGTGCCTACAGAACACTGATGGAAACCAATCCTCAGATGTGGAACTAAACCAGACGGAATTTTCACAAGATGAAGAAGACATCCTAAGCCAAAACCTCTTGAATGTTCCATTCATGCCAAAAGTTGAAGATGTTGGATGTTATAATGAACCACATGAAAGTTGTTGTAGCTTTCAGTTCCCTTTTGAAGATCAAACTTTTTGCTTTTGGTCTTATTGA 873 0.3746 MESEKVYEGSSSSMTILLQSQKLPCSSELVESLLVHNQSSKPSFQGSNSMVNIVNVGDIGVKSSSFFQAFEKEENTDDVDDEKYEVCLHQPGKKRRLTNEQVHFLESNFEIENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGSLKASYDLLKVDYDNLHQEVNKLKDEVNSLKKKLVPREEEENNLVDKSLDDIISQHKSDVVGSECLQNTDGNQSSDVELNQTEFSQDEEDILSQNLLNVPFMPKVEDVGCYNEPHESCCSFQFPFEDQTFCFWSY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo33g00021 290 Coils Coil 161 188 - -
Mepo33g00021 290 Gene3D - 150 190 - -
Mepo33g00021 290 SMART HOX_1 90 152 IPR001356 GO:0003677
Mepo33g00021 290 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Mepo33g00021 290 CDD homeodomain 91 149 IPR001356 GO:0003677
Mepo33g00021 290 Gene3D - 87 149 - -
Mepo33g00021 290 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Mepo33g00021 290 SUPERFAMILY Homeodomain-like 86 150 IPR009057 -
Mepo33g00021 290 Pfam Homeodomain 93 146 IPR001356 GO:0003677
Mepo33g00021 290 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 71 236 IPR045224 GO:0003700
Mepo33g00021 290 Pfam Homeobox associated leucine zipper 148 189 IPR003106 GO:0006355|GO:0043565
Mepo33g00021 290 PRINTS Lambda-repressor HTH signature 119 128 IPR000047 GO:0003677
Mepo33g00021 290 PRINTS Lambda-repressor HTH signature 128 144 IPR000047 GO:0003677
Mepo33g00021 290 FunFam Homeobox-leucine zipper protein HAT5 86 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo33g00021 91 197 Homeobox Transcription Factor Family AT3G01470 65.421 4.33e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo33g00021 Homeodomain 4.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo33g00021 - K09338 gmx:100804328 339.347