Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo33g00016 ATGAGTCTTAGAGGTACCGTTTCCCCAAACTTGGGGAATCTGTCCTTCCTAGTTAAACTTGACCTCAAAAACAATAGCTTCGGTGGTCAGTTTCCTAAAGAGTTATGTTGGTTGCGCCAATTAAAGGTTCTTCATATCAACTACAACGAGTTTGAAGGGGGGATTCCTTCAACATTGGGGAACTTATCACAACTTCAATCTTTGTCTCTCGGCGCTAACAATTTTAATGGTTTTATTCCTCAATCTATCGGTAACCTTCATGGGTTGATAAAATTGGATACCAAACAGAACAAGCTGTTTGGACCCATACCTCGAACAATTTCTAACATATCTTCCATTGAATTTCTCCGTTTATCTTCTAACTACTTTTCAGGTACGATTCCAGAAGAGATTGGCTATCTTGATAAACTTGAGAAACTACTCCTGTTTGAGAATAACTTAAGTGGATCTATTCCTTCCAAAATCTTCAACTTGTCATCACTCACATATTTGGAGGTTGAACAGAATAGCCTCTCAGGCACAATTCCATCAAATACGGGATATAGCCTTCCTAGCCTGCAATATCTACTCTTGAATGATAACAAATTTGTTGGAAATATTCCAAATAACATATTCAACTCTTCTAATCTTATTGTATTTCAATTGTATTCGAATGCATTCAGTGGAACTCTACCCAATATTGCTTTTGGAGATTTAAGATTCCTTGAAGGGCTACTCATATATAACAACAATTTGACAATCGGAGATTCTCATCAATTCTTTACTTCCTTGACAAATTGTAGATATTTGAAATATTTAGAGCTATCAGGGAATCATATACCCAATCTTCCTAAGTCAATTGGAAACCTAACTTCAGAAGACTTCCTTGCAGAATCATGTGGAATTGATGGTAATATTCCCCTAGAAGTTGGAAACATGACCAACTTGTTAAAACTTTCTCTGTATGACAATAATATAAATGGACCAATACCTGGTACATTCAAAGAGTTGCAGAAACTTCAGCAATTGAGTCTTAGCAAAAATGGACTACAAGGATCATTTATTGAAGAGTTTTGTGAAATGAAGAGTTTGGGTGAGTTGTATCTAAACAATAATAAGCTCTCTGGAGTTTTACCAACATGTTTGAGAAATATGACTTCTCTTAGAAAATTGTACATAGGATCTAACAGCCTGAACTCTATGATACCTTCATCTCTTTGGAGTCTCAGAGATATATTAGAGGTAGATTTGTCCTCTAATGCCTTCATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATAGTTTTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCTACAATCATCAGTTCCTTAAAAAATCTGCAGAATCTCTCCTTAGCTCATAATAAATTGAATGGGTCAATTCCCACATCACTTGGTGAAATGGTAAGCTTGGTCTTCTTGGACTTGTCCCAAAATATGCTAGCTGGTCTTATTCCAAAATCATTAGAATCACTTTTGTACCTTCAATACATTAACTTCTCATATAATAAATTACAAGGACAGATTCCTGATGGTGGTCCTTTCAAGAATTTCACGACTCAATCTTTTATGCATAATGGAGAACTTTGTGGAAATCTTCGCCTCCAAGTACCGCCTTGTGGTAAACAAGATAAGAAAATGTCAATGGCAAAGAAGATATTACTCAAATGCATACTGCCCATAGTTGTGCCAGTCTTTCTGGTTGTTGCATGCATCATATGTTTTAGACTTAAAAGTAAAAGTATTGGAGATACTCTTGAAAGGGGTTTGTCAACTTTGGGAGCTCCAAGAAGAATATCATATTATGAACTTGTGCAAGCAACAGATGGATTCAATGAGATCAAATTACTTGGAAGGGGGAGCTTTGGCTCTGTGTATCAAGGGGAGCTTCCAGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAATGCAATGAGAAATCTACGACATCGAAATCTGGTCAAGATTATCAACAGTTGCTCAAATCTTGATTTTAAATCGTTGGTAATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAAATTTCTTACAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCAAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGCGATTTTGGTATTGCCAAGCTCATGGATGCAGGACAATCTAAAACTCATACACAAACTTTGGCTACTATTGGATATCTTGCACCAGAGTATGGATCTAAGGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAGATCTTCACAAGAAAAAAGCCAATAGATGATATGTTTGTTGCAGAACTAAACTTGAAGACATGGATCAATGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATTGACTCACATGTCATCTATTTTTAGTTTAGCCCTGAATTGTTGTGAAGATTCACCTGAAGCAAGAATCAATATGGCAGATGTTATTGCGACGTTAATCAAAATCAAGACTTTGGTTGTTGGCGCAAACACAATCTAG 2709 0.3603 MSLRGTVSPNLGNLSFLVKLDLKNNSFGGQFPKELCWLRQLKVLHINYNEFEGGIPSTLGNLSQLQSLSLGANNFNGFIPQSIGNLHGLIKLDTKQNKLFGPIPRTISNISSIEFLRLSSNYFSGTIPEEIGYLDKLEKLLLFENNLSGSIPSKIFNLSSLTYLEVEQNSLSGTIPSNTGYSLPSLQYLLLNDNKFVGNIPNNIFNSSNLIVFQLYSNAFSGTLPNIAFGDLRFLEGLLIYNNNLTIGDSHQFFTSLTNCRYLKYLELSGNHIPNLPKSIGNLTSEDFLAESCGIDGNIPLEVGNMTNLLKLSLYDNNINGPIPGTFKELQKLQQLSLSKNGLQGSFIEEFCEMKSLGELYLNNNKLSGVLPTCLRNMTSLRKLYIGSNSLNSMIPSSLWSLRDILEVDLSSNAFIGNLPPEIGNLRAIIVLDLSRNQISSNIPTIISSLKNLQNLSLAHNKLNGSIPTSLGEMVSLVFLDLSQNMLAGLIPKSLESLLYLQYINFSYNKLQGQIPDGGPFKNFTTQSFMHNGELCGNLRLQVPPCGKQDKKMSMAKKILLKCILPIVVPVFLVVACIICFRLKSKSIGDTLERGLSTLGAPRRISYYELVQATDGFNEIKLLGRGSFGSVYQGELPDGEMIAVKVIDLQSEAKSKSFDAECNAMRNLRHRNLVKIINSCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLMDAGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRKKPIDDMFVAELNLKTWINGSLPNSIMEVMDSNLVQITGDQIDDILTHMSSIFSLALNCCEDSPEARINMADVIATLIKIKTLVVGANTI 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo33g00016 902 ProSiteProfiles Protein kinase domain profile. 617 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00016 902 Gene3D Transferase(Phosphotransferase) domain 1 693 897 - -
Mepo33g00016 902 Pfam Leucine rich repeat 431 487 IPR001611 GO:0005515
Mepo33g00016 902 Pfam Leucine rich repeat 356 414 IPR001611 GO:0005515
Mepo33g00016 902 SUPERFAMILY L domain-like 6 273 - -
Mepo33g00016 902 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 256 550 - -
Mepo33g00016 902 Gene3D Ribonuclease Inhibitor 247 555 IPR032675 -
Mepo33g00016 902 PANTHER OS04G0122200 PROTEIN 133 893 - -
Mepo33g00016 902 Gene3D Ribonuclease Inhibitor 1 246 IPR032675 -
Mepo33g00016 902 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 693 901 - -
Mepo33g00016 902 FunFam Serine-threonine protein kinase plant-type 598 692 - -
Mepo33g00016 902 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Mepo33g00016 902 SMART LRR_typ_2 14 38 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 474 497 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 257 283 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 183 207 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 306 329 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 378 402 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 354 377 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 134 158 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 62 86 IPR003591 -
Mepo33g00016 902 SMART LRR_typ_2 426 450 IPR003591 -
Mepo33g00016 902 Pfam Protein kinase domain 617 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00016 902 Gene3D Phosphorylase Kinase; domain 1 600 692 - -
Mepo33g00016 902 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 181 - -
Mepo33g00016 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Mepo33g00016 902 SUPERFAMILY L domain-like 292 537 - -
Mepo33g00016 902 SMART serkin_6 617 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00016 902 SMART LRR_sd22_2 474 500 - -
Mepo33g00016 902 SMART LRR_sd22_2 62 88 - -
Mepo33g00016 902 SMART LRR_sd22_2 330 353 - -
Mepo33g00016 902 SMART LRR_sd22_2 450 465 - -
Mepo33g00016 902 SMART LRR_sd22_2 354 380 - -
Mepo33g00016 902 SMART LRR_sd22_2 257 285 - -
Mepo33g00016 902 SUPERFAMILY Protein kinase-like (PK-like) 599 889 IPR011009 -
Mepo33g00016 902 ProSiteProfiles Leucine-rich repeat profile. 262 283 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo33g00016 1 893 Receptor kinase-like Gene Family AT3G47570 37.689 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo33g00016 Pkinase 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo33g00016 - K13420 mtr:25481440 1183.7