Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo33g00011 ATGACTTCTATTATAAGGTTATACATAGGATCTAACAGTCTGAACTCTAAGATACCTTCCTCTCTTTGGAGTGTCATAGATATCTTAGAGGTAGATTTGTCCTCTAATGCCTTCATTGGTAATCTTCCACCTGAGATTGGGAATTTGAGAGCAATTATACTATTAGACCTATCAAGAAATCAGATTTCAAGCAACATTCCAACAACCATTAGTTCCTTACAAACATTGCAGAATCTCTCCTTGGCAGATAATAAACTGAATGGTTCGATTCCCAAATCACTTGGTCAAATGATAAGCTTGATCTCTTTGGACTTGTCCCAAAATATGTTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTGTGTCTCTTCAAATCATCAACTTCTCATATAATAGATTACAAGGAGAGATTCCTGATCGTGGACATTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGATGCACTTTGCGGCGATCCTCGCCTCCTAGTACCTCCATGTGGTAAGCAAGTTGAGAAATGGTCAATGGAAAAAAAGCTTATATTGAAATGCATACTTCCCATTGTTGTGTCAGCCATTTTGATTGTTGCTTGCATCATACTTTTAAAACAAAATAAAAGGAGAAAGAACAAAACTACTCTTGAAAGAGGTTTGCCAACTTTGGGAGCTCCAAGTAGAATATCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAATTTCCTTGGAAGGGGGGGATTTGGCTCTGTTTATCAAGGGAAGCTTCTTGATGGTGACATGATTGCAGTTAAAGTAATTGATTTGCAATCAGAGGCAAAATCAAAGAGCTTTGATGCAGAATGCAAGGCAATGAGAAATCTACGACATCGAAATCTGGTAAAGATTATCAGTACATGCTCAAATCTTGATTTCAAATCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTAGACAAATGGTTATATTCAAATAACTATTGTCTAAATTTCTTACAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTTCCAATGTCTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATCGATGAAGGACAATCTCAAACTCATACACAAACTTTAGCTACTATTGGATACCTTGCACCAGGAGATGTGTACAGCTATGGGATTATGCTAATGGAGATCTTCACAAGAAAAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGCTTGAAGACATGGATCAGTGGATCATTGCCTAATTCAATTATGGAGGTCATGGATTCAAATTTAGTCCAAATAACTGGGGACCAAATTGATGATATATCGACTCACATGTCATCTATTTTTAGTTTAGCCCTGAGTTGTTGTGAAGATTCACCTGAAACAAGAACCAATATGGCAGATGTTATTGCGTCGCTAATCAAAATCAAGGCTTTTGTAGAAGTGGAGTTTTCAATATTGTTTTTGGATTGA 1560 0.3615 MTSIIRLYIGSNSLNSKIPSSLWSVIDILEVDLSSNAFIGNLPPEIGNLRAIILLDLSRNQISSNIPTTISSLQTLQNLSLADNKLNGSIPKSLGQMISLISLDLSQNMLTGVIPKSLESLVSLQIINFSYNRLQGEIPDRGHFKNFTAQSFMHNDALCGDPRLLVPPCGKQVEKWSMEKKLILKCILPIVVSAILIVACIILLKQNKRRKNKTTLERGLPTLGAPSRISYYELVQATNGFNESNFLGRGGFGSVYQGKLLDGDMIAVKVIDLQSEAKSKSFDAECKAMRNLRHRNLVKIISTCSNLDFKSLVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGIAKLIDEGQSQTHTQTLATIGYLAPGDVYSYGIMLMEIFTRKKPTDDMFVAELSLKTWISGSLPNSIMEVMDSNLVQITGDQIDDISTHMSSIFSLALSCCEDSPETRTNMADVIASLIKIKAFVEVEFSILFLD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo33g00011 519 Pfam Protein kinase domain 242 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00011 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Mepo33g00011 519 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Mepo33g00011 519 Pfam Leucine rich repeat 75 134 IPR001611 GO:0005515
Mepo33g00011 519 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 317 513 - -
Mepo33g00011 519 FunFam Serine-threonine protein kinase plant-type 223 316 - -
Mepo33g00011 519 Gene3D Phosphorylase Kinase; domain 1 225 316 - -
Mepo33g00011 519 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 47 165 - -
Mepo33g00011 519 ProSiteProfiles Protein kinase domain profile. 241 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00011 519 SUPERFAMILY L domain-like 2 165 - -
Mepo33g00011 519 Gene3D Ribonuclease Inhibitor 1 177 IPR032675 -
Mepo33g00011 519 Gene3D Transferase(Phosphotransferase) domain 1 317 512 - -
Mepo33g00011 519 SMART serkin_6 241 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo33g00011 519 SUPERFAMILY Protein kinase-like (PK-like) 220 502 IPR011009 -
Mepo33g00011 519 PANTHER OS04G0122200 PROTEIN 1 506 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo33g00011 2 506 Receptor kinase-like Gene Family AT3G47570 37.937 1.06e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo33g00011 Pkinase 6.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo33g00011 - K13420 mtr:25502863 824.313