Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo33g00007 ATGCCCAATTTCCACCCATTTCCAGTAGAAGAAATTCCAAACGAAGAAGAAGTTAATGGCCTAGTATTTGCACAGTTTCAAAATTTTCAAAATGGTGATCATACTTTTTGGATGCATAGTATTAGTTCTGATACGGCTGCGGGAAGGAATGTTCTGCATATTCCTAAGAAGATTGCAATTCAAAGTATTTATGTGAATCAGTCGAAAATTCGAATAGTTGATGATGAAACTGGAGAAGAATATGAATGTGAAGTTCGTGATACAGGAAGTTGGATGGAGAAATACGTTGGAAGCGGGTGGTTTGATTTTGTTATGGCAAAAGAACTCAAAGCTGGAGATTCCTTGTTCTTCACTATTGATAATCCTCCACACAAATTATTTGTATCAGTGATTAGATTAATTAGGATTTTTATGTTTATGTATGTATTTTGTTGA 435 0.3448 MPNFHPFPVEEIPNEEEVNGLVFAQFQNFQNGDHTFWMHSISSDTAAGRNVLHIPKKIAIQSIYVNQSKIRIVDDETGEEYECEVRDTGSWMEKYVGSGWFDFVMAKELKAGDSLFFTIDNPPHKLFVSVIRLIRIFMFMYVFC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo33g00007 144 CDD B3_DNA 52 132 IPR003340 GO:0003677
Mepo33g00007 144 ProSiteProfiles B3 DNA-binding domain profile. 37 134 IPR003340 GO:0003677
Mepo33g00007 144 Gene3D - 16 135 IPR015300 -
Mepo33g00007 144 SUPERFAMILY DNA-binding pseudobarrel domain 34 127 IPR015300 -
Mepo33g00007 144 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 64 132 - -
Mepo33g00007 144 Pfam B3 DNA binding domain 49 132 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo33g00007 B3 3.9e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo33g00007 - K09287 mtr:120578430 110.538