Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo32g00021 ATGATATTAACCTCCACATGGAAAAAAGTGATAGTAATTTATGAACTTAATAATGATTTTTCCTCTGATCCAGGAATACTACTTAGCCTCTCTTATTCTCTAAGACTTGTTGGTTCTGAGATTGATGACCATTTAGCTTTTCCTTCTCTATCCACTCTTTCAAACCCAGAATATACAATTGAAGAAGAGCTTAATAAGCTGAAAAGAAAGAGTAATAGGGTATTCTTGATTGTTCATTCTTCTTTAGAGTTTGCTAACATTCTTTGTGAGAAAGCAAATCAAATAGGTTTGATGGAAAAAGGTTCGGCGTGGATTATCCCAAATGAAGTTGCTGGCCTTCTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAAAACACACTTCATGGAAATGAATGAGACCTTTAGAAAATTTAAATTCAAATTCCAAAGAATGTTTGCACTAGAATACCCTGAAGAAGATAACATTAACCCAAGCATCTTTGCACTTCAAGCATATGATGCAACTAAAGCTATTGCTGAGGCTACAAATAAATTATTACAAGGAAAGTTCAGCCTTGAACAATTCTCAGAAAATATGTTGTCCAGTAAATTTGACAGACCAAGTGGAAATACTTTTTCAAAGAATGGACAATTGCTGCAATCACCAACCTTTAACATAATTAATGTGATAGGGAAAAGCTACAGAGAAATGGCATTTTGGTCTCAGACACTCGGTTTTACTAAGAACTTTATTAGCCATCAAGTAATGGAGACGACAAAAACAAATAGTGATTCTAATGGAGTTTTCAGAACAGTTTATTGGCCTGGAGAGTTACAATTGGTTCCTAAGGGATGGACTCTAAGTAACAAGGAAAGGTCATTGAAAATAGGAGTACCTTCCCATGGCGCCTTTAATCAGTTTGTGAACGTAACACGCGACAAGCTCATGAATAAAACTTTTATCACTGGTTTCTCTATCGATGTATTTAAAGCAGTTGGACTTTTACCGTATGATTTACAATACAAATTTGTTCCCTTCAATGGATCATATGATGAAATGGTTGACCAGGTCTACAATAAGACATTAGATGGTGCTGTTGGTGATACAGACATAATGGCATACAGATACCATTTAGTTGACTTCTCACAACCTTATGTTGAATCTGGCCTCCATATGGTGGTTACCGAGCAACCCGAAAAATCAAAACAAACATGGATGTTTTTGGATGCCTTTACAAAAGAGATGTGGTTGATGATAACATCTATGCATATTTTTGTAGGAGTGGTTATTTGGTTGATTGAAAGGGAAGCTAATCCATATCTAAGGGGATTTAGGTCCATGCTTTGGTTTTTAGTCACTGTACTATTTTATGCACACAGAGAACCAATAAGAAGACCATTGGCTCAAGTTGTACTGACACCATGGTTATTTGCTATTTTCATAGTGACAAATAGTTTCACAGCAAGTTTAACATCCATAACAATTTCACAAGTAAAGTCATCCGTGTTAGATATCCAAACCCTTAAAGAAAGAAATTTACCAGTTGGATGTAACGGAAATTCATTTATTGTGAAGTATTTGTCTGAAGTACTGAAATTCAAGCCTGAGAGTACTCATGTAAGGGTCTCATCAAAGCAGGAAACACTTTCAAGCTTGGTTGCTCCTCACGCAAAAGTATTTCTAGCAAAGTACTCATGTAAGGGTCTCATCAAAGCAGGAAACACTTTCAAGCTTGGTGGCTTTGGCTTTGTATTTCCTAAAGGTTCGAGTCTGGCTACCGACATATCAGAGGCATTACTAAATATGATAGAGAGTGGAGAAACAGAAAAACTAGAAAAAGACATGTTGAATGGGATAGGGAGAGGAGGCAAAACCAATTGTTCTTCTTTAGAAAGAAACAAGGGGAAAGATAATTCATCGATAGGTCTTCCGCCTTTCATTGGCCTGTTTTCGATCTGCTCTACTTTTGCTATTCTTGCATTGTCATATCACATTATCTGTTTGTTGGTGAAGAATATAGAGACCTTGGCTAGCCACATAATAGTAATATTGACACAATTATGGAGAATATGGAGATGGACAACCAACTATTTTTCTTGGTGTTGTTCAAGGATCAGGAGAAGAGTTAGTAATTGCATAGAAATAAGAAATGGGGAGGAGAATGTCACTAATAGCCAGCAAAACCCAGTGGTGGTTGATCATGTTGATAGTGTACTTGCTACTCATTCTTCATGA 2238 0.3637 MILTSTWKKVIVIYELNNDFSSDPGILLSLSYSLRLVGSEIDDHLAFPSLSTLSNPEYTIEEELNKLKRKSNRVFLIVHSSLEFANILCEKANQIGLMEKGSAWIIPNEVAGLLDSVNSSVIFNMQGVVGFKTHFMEMNETFRKFKFKFQRMFALEYPEEDNINPSIFALQAYDATKAIAEATNKLLQGKFSLEQFSENMLSSKFDRPSGNTFSKNGQLLQSPTFNIINVIGKSYREMAFWSQTLGFTKNFISHQVMETTKTNSDSNGVFRTVYWPGELQLVPKGWTLSNKERSLKIGVPSHGAFNQFVNVTRDKLMNKTFITGFSIDVFKAVGLLPYDLQYKFVPFNGSYDEMVDQVYNKTLDGAVGDTDIMAYRYHLVDFSQPYVESGLHMVVTEQPEKSKQTWMFLDAFTKEMWLMITSMHIFVGVVIWLIEREANPYLRGFRSMLWFLVTVLFYAHREPIRRPLAQVVLTPWLFAIFIVTNSFTASLTSITISQVKSSVLDIQTLKERNLPVGCNGNSFIVKYLSEVLKFKPESTHVRVSSKQETLSSLVAPHAKVFLAKYSCKGLIKAGNTFKLGGFGFVFPKGSSLATDISEALLNMIESGETEKLEKDMLNGIGRGGKTNCSSLERNKGKDNSSIGLPPFIGLFSICSTFAILALSYHIICLLVKNIETLASHIIVILTQLWRIWRWTTNYFSWCCSRIRRRVSNCIEIRNGEENVTNSQQNPVVVDHVDSVLATHSS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo32g00021 745 Pfam Bacterial extracellular solute-binding proteins, family 3 322 614 IPR001638 -
Mepo32g00021 745 Pfam Receptor family ligand binding region 6 230 IPR001828 -
Mepo32g00021 745 Gene3D - 174 294 - -
Mepo32g00021 745 FunFam Glutamate receptor 290 404 - -
Mepo32g00021 745 CDD GluR_Plant 295 617 - -
Mepo32g00021 745 SMART GluR_14 294 619 IPR001320 GO:0015276|GO:0016020
Mepo32g00021 745 Gene3D - 406 546 - -
Mepo32g00021 745 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 675 IPR015683 -
Mepo32g00021 745 Gene3D - 295 405 - -
Mepo32g00021 745 FunFam Glutamate receptor 1 163 - -
Mepo32g00021 745 FunFam Glutamate receptor 405 537 - -
Mepo32g00021 745 Gene3D - 1 164 - -
Mepo32g00021 745 SUPERFAMILY Periplasmic binding protein-like I 6 286 IPR028082 -
Mepo32g00021 745 Pfam Ligand-gated ion channel 615 654 IPR001320 GO:0015276|GO:0016020
Mepo32g00021 745 SUPERFAMILY Periplasmic binding protein-like II 271 614 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo32g00021 7 613 Ion Channels AT5G11210 31.722 6.87e-95 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo32g00021 - - mtr:11432453 1107.82