Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo32g00020 ATGACACTATCTTTGTTGCTAAACATTTCTGGAATGGGAAGGAAATCTTCATTACAACTCAATATTTTCTGCTTCAATATTATCCTGCAATTGTCAGCATGGTCAGTTGTACAAAGAGGCTATTCCTTAGAGCCACAAAGGACCAATAATATGAGTATAGGTGCTGTTCTTGATTTGGTTTCGTTAATGGGAAAACAGCAGAAGATGGCAATGGAAATTGCAGTGGAAGAGTTCAACAACCAATCTACTTCTTCCAAGCTGGATTTGCAGATAAAAGATTCACATGGAAATTCTGCTCAAGTAATTGCAAGTGTTATGGATCTCTCACAAAGAAACCAAGTGCATGCCATCATAGGAACTATCACACACAATGAAGCAACACTGGCAAGTGAATTCAGTGACACAATAAAGAACATTCCTATCATGTCTCTAACTTCATTCATAGCCAAACCAGAATTATTATCTCCAAGATTGCCACATTTCATTCAAGTAGGGGATGATATTAACCTTCACATGCAATGCATTGCAGCAATTGTAGGAGAATTCAAATGGAAAAAGGTGACAGTAATTTATGAACTTAATAATTACTTTTCCTCTGATCCGGGGATACTACTAAGCCTCTCTTATTCACTTAGACTTGTTGGTTCTGAGATTGATAACCATTTAGCTTTTCCTTCGTTATCAACTCTTTCAGACCCAAAATCTATAATTGAAAAAGAGCTTAATAGCTTGAAAAAGAAGAGTAATAATAGGGTCTTCTTGATTGTTCATTCTTCTTTAGAGTTGGCTAACATTCTTTGTGAAAAAGCAAATCAAATAGGTTTGATGGAAAAAGGTTCTGCGTGGATTATCTCAAATGATGTTGCTGGCCTTCTTGATTCAGTAAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAAAACACACTTCATGGAAATGAATGAGACCTTTAGAAAATTTAAATTCAAATTCCAAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAACATTAACCCAAGCATCTTTGCATTTCAAGCATATGATGCAACTAAAGCTATTGTTGAAGCTGCAAATAAATCATCACAAGGAAAGTTAAGACTTGAAGAAATCTCTGAAACGATTTTGTCAAAGAATGGACAATTGCTGGAATCACCAACCTTCAACATAATTAATGTGATAGGGAAAAGTTATAGAGAAATGGCATTTTGGTCTCCATCACTTGGTTTTTCCAAGAACATTGCCGGCTATAATAAGGTAATGGAGATAAATACAAATAATGATGATTTGAATGAAGTTTTCAAAACAGTTTATTGGCCTGGAGAATTAATATCGGTTCCGAAGGGTCACAATAATGAGGAAAGGTTTTTGAGAATAGGAATACCTTCCAATGGTGCTTTTTCTCAGTTTGTGAATGTGGAATATGACCAGAGCAAGAACGAAACTTCCATCTCTGGTTTCTCAATCAATGTGTTTAAAGCAGCTGTCAAACGCTTACCTTATGATTTAAATTACACGTTTTCTCCCTTCGGAGGCTCATATGATGAAATGGTTGATCAAGTCTACAATAAGACATTAGATGCTGCTGTTGGTGATACATCAATAGTGGCATATCGATACCATTTAGTGGACTTCTCACAACCTTATGTTGAATCTGGCCTCCACATGGTGGTTACCGAACAACCGGAAAAATCGAAAGAAACATGGATGTTTTTGCATGCCTTTAAAAAAGAGATGTGGCTGATGATGATAGCTATGCATATTTTTGTTGGATTTGTTATTTGGATGATTGAAAGAGAAGTAAATGAAGATCTAAGGGGATTAGGGTCTATGCTTTGGTTTTTAGTCACTGTACTATTTAATGCACACAGAGAACCAATAAGAAGACCCTTAGCACGATTTGTGCTGACACCATGGTTCTTTGCTATTTTCATTGTGACAAATAGTTTCACAGCAAGTTTGACATCCATAACTATTTCACAAGTAAAGCCATCAGTGTTAAATATCGAGACCCTTAAAGAAAGAAATTCCCCGATTGGTTGTGATGAAAATTCTTTTATTCTCAAGTATTTGACTGAAGTACTAAGTTTCAAGCGTGAGAACATCAGAAAATTCAATTCCATTAATGACTACCCTGCTGCCTTTGAGAACAAGGAAATAGAAGCCGCTTTTTTTGTCGCACCTCACGCTAAAGTATTTCTAGCAAAGTACTCATGTAAGGGCCTCATCAAAGCAGGGAACACTTTCAGGCTTGGTGGCTTTGGTTTTGTATTTCCAAAAGGTTCTAGGCTGGCTGCAGACATATCAGAGGCATTGTTGAATATGATAGAGAGTGGAGAAACAGAAGAACTAGAAAAAGATATGTTGAATGAGATTGAGAATGAAAGCAAAGCCAATTGTTCTTCTTTAGAGAGAAAGGGAAAAAATAATTCATCCATAGGCCTTCCGCCTTTCCTTGGTCTATTTTCGATCTGTTCTACTTTTGCTATTCTTGCTTTGTCATATCACATGATTTGTTTATTGGTGAAAAATGTAGAGACCTTAAAGAATTACACAATATTAACATTAAAACAGTTATGGAAAATATGGAGATGGACAACCAATTTTTTTTCTCGGTGCTGTTCGAAACTCCAATCAAGGATCATGACAAGAGTAAGTAGTTGCACAGAAACAAGAAATGCAGAAGAGAATGTCACAAATAGCCAGCAAATCCCAGTGGTGATCGAGCTTGTTGATAGTGTACTGGCTGCTCATGCTTCATGA 2772 0.3633 MTLSLLLNISGMGRKSSLQLNIFCFNIILQLSAWSVVQRGYSLEPQRTNNMSIGAVLDLVSLMGKQQKMAMEIAVEEFNNQSTSSKLDLQIKDSHGNSAQVIASVMDLSQRNQVHAIIGTITHNEATLASEFSDTIKNIPIMSLTSFIAKPELLSPRLPHFIQVGDDINLHMQCIAAIVGEFKWKKVTVIYELNNYFSSDPGILLSLSYSLRLVGSEIDNHLAFPSLSTLSDPKSIIEKELNSLKKKSNNRVFLIVHSSLELANILCEKANQIGLMEKGSAWIISNDVAGLLDSVNSSVIFNMQGVVGFKTHFMEMNETFRKFKFKFQRKFALEYPEEDNINPSIFAFQAYDATKAIVEAANKSSQGKLRLEEISETILSKNGQLLESPTFNIINVIGKSYREMAFWSPSLGFSKNIAGYNKVMEINTNNDDLNEVFKTVYWPGELISVPKGHNNEERFLRIGIPSNGAFSQFVNVEYDQSKNETSISGFSINVFKAAVKRLPYDLNYTFSPFGGSYDEMVDQVYNKTLDAAVGDTSIVAYRYHLVDFSQPYVESGLHMVVTEQPEKSKETWMFLHAFKKEMWLMMIAMHIFVGFVIWMIEREVNEDLRGLGSMLWFLVTVLFNAHREPIRRPLARFVLTPWFFAIFIVTNSFTASLTSITISQVKPSVLNIETLKERNSPIGCDENSFILKYLTEVLSFKRENIRKFNSINDYPAAFENKEIEAAFFVAPHAKVFLAKYSCKGLIKAGNTFRLGGFGFVFPKGSRLAADISEALLNMIESGETEELEKDMLNEIENESKANCSSLERKGKNNSSIGLPPFLGLFSICSTFAILALSYHMICLLVKNVETLKNYTILTLKQLWKIWRWTTNFFSRCCSKLQSRIMTRVSSCTETRNAEENVTNSQQIPVVIELVDSVLAAHAS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo32g00020 923 Gene3D - 658 755 - -
Mepo32g00020 923 FunFam Glutamate receptor 571 703 - -
Mepo32g00020 923 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 52 867 IPR015683 -
Mepo32g00020 923 Pfam Ligand-gated ion channel 790 828 IPR001320 GO:0015276|GO:0016020
Mepo32g00020 923 CDD GluR_Plant 458 792 - -
Mepo32g00020 923 Gene3D - 453 582 - -
Mepo32g00020 923 PIRSF IGluLR_plant 18 382 IPR017103 -
Mepo32g00020 923 PIRSF IGluLR_plant 371 908 IPR017103 -
Mepo32g00020 923 SMART GluR_14 461 794 IPR001320 GO:0015276|GO:0016020
Mepo32g00020 923 Gene3D - 756 789 - -
Mepo32g00020 923 FunFam Glutamate receptor 455 570 - -
Mepo32g00020 923 SUPERFAMILY Periplasmic binding protein-like II 455 789 - -
Mepo32g00020 923 Pfam Bacterial extracellular solute-binding proteins, family 3 484 789 IPR001638 -
Mepo32g00020 923 SUPERFAMILY Periplasmic binding protein-like I 46 452 IPR028082 -
Mepo32g00020 923 FunFam Glutamate receptor 171 341 - -
Mepo32g00020 923 Gene3D - 168 342 - -
Mepo32g00020 923 Pfam Receptor family ligand binding region 67 378 IPR001828 -
Mepo32g00020 923 Gene3D - 48 167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo32g00020 21 851 Ion Channels AT2G29120 30.804 7.83e-110 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo32g00020 - - mtr:11432453 1348.95