Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo31g00004 ATGACTTGTTGCTCTCAATTTTTTAGGTCTTCTTCCGCCACACGATTCACCCGAACAGATATAGATATTTCAGAACTTCACAATGTCAAAATTTACACTTATAAGGAATTGCGAATTGCCACTTCAGGGTTTAGTCTTGCAAACAAGATAGGGCAAGGAGGTTTTGGATCAGTCTATAAGGGAAAGTTGAGAGATGGATGCATGGTAGCTATAAAAGTTTTATCAGCTGAATCAAAACAAGGGGTCCAAGAGTTCTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCATGAGAATCTTGTGAAGTTGAATGGTTGTTGTGTGGAAGACAATCATAGAATTTTGGTATATGGCTATCTTGAGAACAATAGCCTAGCACAAACACTTCTTGGTTCAGGCCATAGTAGCATTAAATTCAGTTGGCTTGTAAGGCGCAACATTTGCATAGGTGTTGCTCGAGGGCTTGCATTCCTTCATGGAGAGGTTCGACCACATATAATTCACAGAGATATAAAAGCCAGCAATATATTACTTGACACAGATCTCCAACCCAAAATTTCAGATTTTGGCCTTGCAAAGCTTATCCCTCCAAACCTGACTCATATTAGTACAAGGGTTGCTGGAACTGCTGGTTATGTCGCACCTGAGTATGCAATACGAAATCAAGTGACAAGAAAATCAGACATCTATAGTTTTGGAGTGCTACTATTAGAAATTGTTAGTGGGAGGCCCAACACAAACAGACGCTTACCCGTTAAAGAACAATATCTTCTTACAAGAGCATGGGATTTGTATGAGGAAGGGGAGCTAAAAAATTTGGTGGATGTTTTTCTAGAAGGGGACTTCAATGTTGAGGAGGCAGTCAAATTTTGCAAAGTTGGTCTTCTTTGCACACAGGACTCTCCTGAGCTCCGGCCTTCTATGTCCACTGTGCTTAAAATGCTTATTGGTGAAAAAGATGTGAACGATGATAATATGATAAAACCAGGGATGATATTTGAATTTGTAGATGCCAATGACCTAGGGAACAAAAGAGGTAAGGCTGAAATGGAAAGTACATGTACTTCTTTGTTGGCAGGTTCAGGGAATCAAGATGATTCATCTTCATCAGGAACCGGGACCTCTTTTGCTACCATGACTTTCACTGCTATTTATGATCGAACCAATTAA 1170 0.3983 MTCCSQFFRSSSATRFTRTDIDISELHNVKIYTYKELRIATSGFSLANKIGQGGFGSVYKGKLRDGCMVAIKVLSAESKQGVQEFLTEIKVISSIEHENLVKLNGCCVEDNHRILVYGYLENNSLAQTLLGSGHSSIKFSWLVRRNICIGVARGLAFLHGEVRPHIIHRDIKASNILLDTDLQPKISDFGLAKLIPPNLTHISTRVAGTAGYVAPEYAIRNQVTRKSDIYSFGVLLLEIVSGRPNTNRRLPVKEQYLLTRAWDLYEEGELKNLVDVFLEGDFNVEEAVKFCKVGLLCTQDSPELRPSMSTVLKMLIGEKDVNDDNMIKPGMIFEFVDANDLGNKRGKAEMESTCTSLLAGSGNQDDSSSSGTGTSFATMTFTAIYDRTN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo31g00004 389 SUPERFAMILY Protein kinase-like (PK-like) 21 315 IPR011009 -
Mepo31g00004 389 FunFam Putative LRR receptor-like serine/threonine-protein kinase 120 327 - -
Mepo31g00004 389 Gene3D Transferase(Phosphotransferase) domain 1 120 329 - -
Mepo31g00004 389 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo31g00004 389 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Mepo31g00004 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 340 - -
Mepo31g00004 389 ProSiteProfiles Protein kinase domain profile. 44 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo31g00004 389 Pfam Protein kinase domain 46 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo31g00004 389 CDD STKc_IRAK 50 315 - -
Mepo31g00004 389 Gene3D Phosphorylase Kinase; domain 1 16 119 - -
Mepo31g00004 389 FunFam cold-responsive protein kinase 1 15 119 - -
Mepo31g00004 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo31g00004 32 332 Receptor kinase-like Gene Family AT1G56120 54.485 4.40e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo31g00004 Pkinase 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo31g00004 - - gmx:100797257 610.142