Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05116 ATGTCTTCCGTCTTAGAGCACTTGTTGGATGTGGAGGAGCAGCAGCAGCCGAAAATCAAGATAAAAAATCTGAGAAAAGAATCGGATGATGGGAAGCTTCAAATACTGAAAGGCATCACCGTTGACATCCCAAAAGGTATGGTTGTTGGGATCATAGGCCCTAGTGGTAGCGGCAAGTCAACTCTCTTAAGGGCCTTGAATCGCCTCTGGGAGCCATCTTCCTCCTCCGTCTTCCTCGATGGCGTAGACATATGTAACCTTGACGTTCTTTCCCTCCGCCGTAAGGTCGCCATGCTCTTTCAGCTCCCTGCTCTCTTTGAAGGGACAGTTGCGGACAACGTGAGATATGGTCCACAACTGAGGGGAATAAAGCTAACGGACGATGAGGTGGGGAAGTTGCTGTTAATGGCTGATCTAGATGCTTCTACTTTCAAGGATAAGTCAGGTGCTGACCTCTCTGTGGGTCAGGCTCAAAGAGTTGCACTTGCCAGGACTCTAGCTAACTCACCCGAGGTTTTGCTGCTAGATGAGCCTACTAGTGCATTAGATCCAATATCCACAGAAAACATTGAAGCTGCCCTCATGAAGTTGAACAAGAATCAGGGCATGACACTCATCATGGTTTCTCATAGCATCAAACAAATACAGAGGATGGCTGATGTAGTGTGCTTGGTTGTTGATGGTCAAATTGTTGAAGTTCTTAAGCCTAATCAACTCTCTCAAGCTCAGCATCCCATGGCAAGGAGGTTTCTTGAACTCAGTTCTTAA 768 0.4688 MSSVLEHLLDVEEQQQPKIKIKNLRKESDDGKLQILKGITVDIPKGMVVGIIGPSGSGKSTLLRALNRLWEPSSSSVFLDGVDICNLDVLSLRRKVAMLFQLPALFEGTVADNVRYGPQLRGIKLTDDEVGKLLLMADLDASTFKDKSGADLSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEAALMKLNKNQGMTLIMVSHSIKQIQRMADVVCLVVDGQIVEVLKPNQLSQAQHPMARRFLELSS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05116 255 SMART AAA_5 45 236 IPR003593 GO:0016887
Mepo2g05116 255 CDD ABC_PstB_phosphate_transporter 19 239 IPR005670 GO:0005315|GO:0016020|GO:0035435
Mepo2g05116 255 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 6 254 IPR005670 GO:0005315|GO:0016020|GO:0035435
Mepo2g05116 255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 252 IPR003439 GO:0005524
Mepo2g05116 255 Gene3D - 14 254 IPR027417 -
Mepo2g05116 255 Pfam ABC transporter 36 180 IPR003439 GO:0005524
Mepo2g05116 255 ProSitePatterns ABC transporters family signature. 152 166 IPR017871 GO:0005524|GO:0016887
Mepo2g05116 255 FunFam ABC transporter, ATP-binding protein 16 250 - -
Mepo2g05116 255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 242 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05116 Mepo-Chr2 59001113 59002408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05116 33 245 Calmodulin-binding Proteins AT2G36910 32.883 2.50e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05116 K02068 - gmx:100791365 373.629