Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05112 ATGGGAGATTCGCCACATAAAGGAGGGGGAGATGGCTGTAAGTCATTGATGGAAGACCTCCTCGGACTTCTAAGGATCCGCATTAAGCGTGGCGTCAACCTTGCCGTTCGTGATGTTAATACTAGTGATCCATACGTCGTCGTTAAGATGGGCAAGCAGAGACTCAAGACTCATGTGATTAAAAAGGATGTCAACCCTGAGTGGAATCAAGACCTTACACTATCTATCACAGATCCCATTCTTCCATTCAAACTGACTGTGTATGACTATGACACATTTAGCAAAGATGACAAAATGGGAGATGCTGATTTTGACCTCTCACCATATATAGAGGCCTTAAAGACGAACTTAGAAGGCCTCCCAGAAGGTACTATAATCACCAGAATACAACCGTGCAGACAAAACTGCTTGGCAGAGGAGAGTTGCATCACTTATTCCAATGGCAAAGTTGTCCAAGATGTTGTCCTTAGATTGAGAAATGTTGAATGTGGTGAAGTGGAAATTCAATTGCAATGGATCGATCTTCCCGGTTCCAGGGGTTTATAA 546 0.4341 MGDSPHKGGGDGCKSLMEDLLGLLRIRIKRGVNLAVRDVNTSDPYVVVKMGKQRLKTHVIKKDVNPEWNQDLTLSITDPILPFKLTVYDYDTFSKDDKMGDADFDLSPYIEALKTNLEGLPEGTIITRIQPCRQNCLAEESCITYSNGKVVQDVVLRLRNVECGEVEIQLQWIDLPGSRGL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05112 181 Pfam C2 domain 22 108 IPR000008 -
Mepo2g05112 181 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 20 172 IPR035892 -
Mepo2g05112 181 CDD C2_ArfGAP 21 164 - -
Mepo2g05112 181 ProSiteProfiles C2 domain profile. 8 119 IPR000008 -
Mepo2g05112 181 Gene3D C2 domain 21 176 IPR035892 -
Mepo2g05112 181 SMART C2_3c 23 118 IPR000008 -
Mepo2g05112 181 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 20 179 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05112 Mepo-Chr2 58962191 58963416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05112 54 181 C2H2 Transcription Factor Family AT1G70790 56.923 7.89e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05112 - - fve:101307695 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05112 2 58962191 58963416 Mepo7g00923 7 14423070 14425816 PCT