Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05110 ATGGCAGCGGCGAAGCTAAGATGGGGAGAATTGGAAGAAGATGATGGCGAAGATCTTGATTTCCTGTTACCACCACGTCAGGTGATAGGTCCTGATGAAAATGGAATCAAAAGGGTTATTGAGTACAAATTCGATGATGATGGTAATAAGGTTAAGATCACTACAACCACTCGCACCCGCAAACTTGCCAACGCGCGTCTCAGCAAACGCGCCGTTGAGCGCCGTTCCTGGCCTAAGTTCGGCGACGCCGTTCATGAAGACGTTGGTGCCCGCCTCACTATGGTCTCCACCGAAGAGATCCTTCTCGAACGCCCCAAACCACTTGGTTCCAACAAGGAGGATCCAAAGACTGCTGACCCACTGTCTCAATTCAATAAAGGTGCTGTTCTTATGGTATGCAGGACTTGCGGGAAGAAGGGTGATCATTGGACTTCAAGGTGTCCATATAAGGATCTCGCACAGCCGCCTGAGACTTTTGTTGATAAACCTGTTGCAACTGATGCTGCTCCTGGGGCTTCAGCTGCCTCAGCAAAGGGTGCATATGTACCTCCTAGCCTGAGAGCTGGTGCCGAGAGGACTACTGGCTCTGACATGAGGCGAAGGAACGATGAGAATTCCGTTCGGGTAACCAACCTCTCCGAGGACACAAGGGAGCCTGATTTACTTGAGCTTTTCCGTCCTTTTGGTGCTGTCAGTAGGGTCTATGTTGCTATTGATCAGAAGACTGGCATGAGTAGGGGCTTTGGCTTTGTCAACTTCGTTAGCAGGGAAGATGCTCAGAGGGCTATCAACAAACTCAATGGATATGGCTACGACAATCTCATCCTCAGAGTTGAATGGGCCACCCCAAGAACAACCTAA 861 0.5006 MAAAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKRVIEYKFDDDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLGSNKEDPKTADPLSQFNKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFVDKPVATDAAPGASAASAKGAYVPPSLRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRTT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05110 286 Gene3D - 168 286 IPR012677 -
Mepo2g05110 286 FunFam Eukaryotic translation initiation factor 3 subunit G 169 286 - -
Mepo2g05110 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 207 273 IPR000504 GO:0003723
Mepo2g05110 286 SMART rrm1_1 206 279 IPR000504 GO:0003723
Mepo2g05110 286 SUPERFAMILY RNA-binding domain, RBD 193 285 IPR035979 GO:0003676
Mepo2g05110 286 CDD RRM_eIF3G_like 206 281 IPR034240 -
Mepo2g05110 286 PIRSF Transl_init_eIF-3_RNA-bind 1 286 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mepo2g05110 286 Pfam Eukaryotic translation initiation factor 3 subunit G 27 152 IPR024675 -
Mepo2g05110 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 205 283 IPR000504 GO:0003723
Mepo2g05110 286 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 5 285 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mepo2g05110 286 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 17 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05110 Mepo-Chr2 58945808 58947055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05110 4 286 Eukaryotic Initiation Factors Gene Family AT3G11400 68.153 1.37e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05110 K03248 - gmx:100818725 496.123