Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05109 ATGAGGAGGAATTGTAACCTAGAACTCTGCCTTTTTCCTCTTTATGATTCTGGCAATCACAACAACCACCACATGGGGGTAGAAGAGGAAAGCCCAATGCAAAATCAGCAACAGCCGCTGACCATTTTCTATGATGGGAAGATGTGTCTTACTGATGTCACAGAGTTTCAGGCCAAATCCATCTTAATGCTGGCAAATAAAATTAAGGTGCAAGAAAAAGTGAAGACACCAACAATAGTGCAGTCTCCTCGTCAACCTGGGTCTGGCCTTTCAATGAAGAGATCTTTGCAAAGTTTTCTACAGAAGAGAAAGAATAGGGTCCAAGAAGCATCTCCATACCATCACTAG 348 0.4253 MRRNCNLELCLFPLYDSGNHNNHHMGVEEESPMQNQQQPLTIFYDGKMCLTDVTEFQAKSILMLANKIKVQEKVKTPTIVQSPRQPGSGLSMKRSLQSFLQKRKNRVQEASPYHH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05109 115 Pfam Jas motif 93 113 IPR018467 -
Mepo2g05109 115 MobiDBLite consensus disorder prediction 78 105 - -
Mepo2g05109 115 ProSiteProfiles Tify domain profile. 33 67 IPR010399 -
Mepo2g05109 115 MobiDBLite consensus disorder prediction 78 115 - -
Mepo2g05109 115 Pfam tify domain 36 66 IPR010399 -
Mepo2g05109 115 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 27 113 IPR040390 -
Mepo2g05109 115 SMART tify_2 33 67 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05109 Mepo-Chr2 58940734 58941273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05109 1 114 Tify Gene Family AT1G30135 44.882 1.23e-22 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo2g05109 tify 7.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05109 - - gmx:100500349 141.354