LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g05106	ATGAAGAAAGTTGGATTAGTGGGAGGGAAGAAGAGACAAAATATGGTAAAATCATCAGAATCAGCGGCGCAATATGAACGATTTTCAAAGGATTTTGTAATGGGAGGTGCAGCAGCAATCATATCCAAAACTGCAGTGGCACCAATTGAGAGAGTGAAGCTTTTATTACAAAACCAAAGCGAAATGATTAAAAGAGGAAACCTTAAAACACCATACCTTGGTTTATCTAACACCTTTAAGAGGGTCTTTGCTGAAGAGGGTCTCCTTGCCTTTTGGAGAGGTCACCAGGCCAATGTTATTAGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAACCATCTTTGGATTTTCCAGAGACAAAGATGGTTACATCAAGTGGTTTGCTGGCAATGTGGCTTCAGGCAGTGCTGCCGGAGCTACTACCTCAATACTTTTGTATCATTTGGACTTTGCACGTACAAGATTGGCCACTGATTCTCACCGTCAGTTCAAAGGACTAATTCATGTATATAGTAAAACAATATCAACTGATGGTGTTGCTGGCTTGTACAGGGGATTCGGTGTTTCAATATTGGGAATCACCATGTATCGAGGAATGTACTTTGGGATATATGACACCATGAAGCCTATTGTTTTAGTTGGCCCTTTTGAGGGGAACTTCTTTGCTAGTTTCTTGTTAGGTTGGAGCATCACAACTGTATCTGGTGTCTGTGCATATCCTTTTGACACATTACGCCGGCGTATGATGCTAACCTCTGGACACCAAAACAAGTATTATAATGCAATGCATGCATTCCGTGAGATTGTTGGACAAGAGGGTTTCTTAGCTCTATTTCGAGGAGTCACAGCAAACATGCTTCTAGGGATGGCGGGAGCTGGGGTGCTTGCTGGCAAAGTTGAGCTGCTGCAAATTGAAGAAATTGAAACTCATCTTGCCTAA	957	0.418	MKKVGLVGGKKRQNMVKSSESAAQYERFSKDFVMGGAAAIISKTAVAPIERVKLLLQNQSEMIKRGNLKTPYLGLSNTFKRVFAEEGLLAFWRGHQANVIRYFPTQAFNFAFKGYFKTIFGFSRDKDGYIKWFAGNVASGSAAGATTSILLYHLDFARTRLATDSHRQFKGLIHVYSKTISTDGVAGLYRGFGVSILGITMYRGMYFGIYDTMKPIVLVGPFEGNFFASFLLGWSITTVSGVCAYPFDTLRRRMMLTSGHQNKYYNAMHAFREIVGQEGFLALFRGVTANMLLGMAGAGVLAGKVELLQIEEIETHLA	318

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g05106	318	PRINTS	Mitochondrial carrier protein signature	31	44	IPR002067	GO:0055085
	Mepo2g05106	318	PRINTS	Mitochondrial carrier protein signature	94	114	IPR002067	GO:0055085
	Mepo2g05106	318	PRINTS	Mitochondrial carrier protein signature	189	207	IPR002067	GO:0055085
	Mepo2g05106	318	PRINTS	Mitochondrial carrier protein signature	146	164	IPR002067	GO:0055085
	Mepo2g05106	318	PRINTS	Mitochondrial carrier protein signature	44	58	IPR002067	GO:0055085
	Mepo2g05106	318	PRINTS	Mitochondrial carrier protein signature	233	255	IPR002067	GO:0055085
	Mepo2g05106	318	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	26	119	IPR018108	-
	Mepo2g05106	318	PRINTS	Adenine nucleotide translocator signature	229	245	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Mepo2g05106	318	PRINTS	Adenine nucleotide translocator signature	72	93	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Mepo2g05106	318	PRINTS	Adenine nucleotide translocator signature	131	144	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g05106	Mepo-Chr2	58924942	58928010	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g05106	26	310	Antiporters	AT5G17400	74.315	2.27e-153	430

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g05106	K05863		-	gmx:100798418	477.633

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