Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05102 ATGTGGATGGTGGGTTACAATGAAGGTGGTGAGTTCAACATGGCTGATTATCCATTTAGTGGAAGGAAACTAAGGCCTCTCATGCCAAGACCAGTCCCAGTCCCAGTCCCAGTCCCTACTACTTCTCCTAACAACACTTCAACTATAACTCCTTCCTTAAACCGCATTCATGGTGGCAATGATTTATTTTCACAATATCATCACAATCTGCAGCAGCAAGTAGGAGATCATAGCAAGAGATCAGAGTTGAATAATCAAGCAGCAGTTGTGGTGAGTTCAAGGTGGAATCCAACACCAGAACAGTTAAGAGCACTGGAAGAATTGTATAGAAGAGGAACAAGAACACCATCTGCTGAGCAAATCCAACAAATCACTGCCCAGCTTAGAAAGTTTGGAAAAATTGAAGGAAAAAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAAAAACGACGCCGTCAAATGGAATCAGCTGCTGAGTTTGATTCTGCTCTTGAAAAGAAAGAATTAGGCGCAAGTAGGACAGTGTTTGAAGTTGAACACACCAAAAACTGGCTACCCTCTACAAATTCCAGTACCAGTACTCTTCCTCTTGCAGAGGAATCTGTTTCAATTCAAAGGGGGGCAGCAGCAGCAAAAGCAGACCAGTACTCTAGAACAGATGGATGGCTCCAATTCGATGAAGCAGAATTACAGCAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTAACTTCTTCTTGTCCTACTCCTACCCTCTTAAACACTACACAACAACATATTTCTAATTTCTCCTCTACAACAACAGCTAGCATGGCCACCACAACCACAGTAACAACTAGACTTATGGACCCAAAACTCATCAAGACTCATGATCTCAACTTATTCATTTCACCTCACACATACAAAGAAAGAGAAAACGGTTTTATCCACTTAAGCAGTATCAACAATAGTACTCATCAAAATGATCATTGTTTGGAATCTCATCAAACCCTTCAACTTTTCCCAATAAGGAATGGAGATCATGGATGCAGTGATCATCATAACATTATTAACCAACACAAAGAGACAGAGATATCAGCTTCAGCAATCAATGCACCCAACCAGTTTATTGAGTTTCTTCCGTTGAAAAACTGA 1161 0.4065 MWMVGYNEGGEFNMADYPFSGRKLRPLMPRPVPVPVPVPTTSPNNTSTITPSLNRIHGGNDLFSQYHHNLQQQVGDHSKRSELNNQAAVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEFDSALEKKELGASRTVFEVEHTKNWLPSTNSSTSTLPLAEESVSIQRGAAAAKADQYSRTDGWLQFDEAELQQRRNFMERNATWHMMQLTSSCPTPTLLNTTQQHISNFSSTTTASMATTTTVTTRLMDPKLIKTHDLNLFISPHTYKERENGFIHLSSINNSTHQNDHCLESHQTLQLFPIRNGDHGCSDHHNIINQHKETEISASAINAPNQFIEFLPLKN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05102 386 ProSiteProfiles 'Homeobox' domain profile. 98 153 IPR001356 GO:0003677
Mepo2g05102 386 SMART HOX_1 90 157 IPR001356 GO:0003677
Mepo2g05102 386 Gene3D - 90 153 - -
Mepo2g05102 386 SUPERFAMILY Homeodomain-like 93 159 IPR009057 -
Mepo2g05102 386 FunFam WUSCHEL-related homeobox 4 92 159 - -
Mepo2g05102 386 Pfam Homeodomain 93 152 IPR001356 GO:0003677
Mepo2g05102 386 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 73 380 IPR044555 GO:0003700|GO:0099402
Mepo2g05102 386 CDD homeodomain 94 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05102 Mepo-Chr2 58900077 58902275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05102 1 386 Wox Gene Family AT3G18010 35.821 9.72e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo2g05102 Homeodomain 9.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05102 - - psat:127106827 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05102 2 58900077 58902275 Mepo2g05102 2 58900077 58902275 ECH