Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05042 ATGGGAAAACTGGAATTAAGCTATGGAGGTTCGTTAAATTTTGTTTTTGCCTTGGTGTTTTCTATTTTGGTTATCTCAATAAGGTGTGAAGATGTTGAGGTTATGAATATTTTGAAGAAAACCATAAATGCTCCGGTTACATTTCAATGGACAAATCTTGATGTATGTAAATGGAAACACGTTAATTGTGATTCAACAAAACGTGTCATCGCAGTTCAAATAGGGAACCAGAATCTTCAAGGCTTTCTCCCGAAGGAACTTGTGATGTTAACGACATTGCAAAAGTTCGAGTGTCAAAGAAACAACCTCACCGGCCCATTCCCTTACCTCTCAAAGTCACTACAGAGGCTTCTAATCCACGATAACAAATTTAGCTATATTCCTAACGATTTCTTCACAGGGATGAGCAATTTGCAAGAAGTAGAAATCGACAACAACCCCTTGCCTCTGTGGCAAATTCCTAATTCTCTTAAAGATTGCGTTGCACTCCAAACTTTCAGTGCTGAAAGTGTTAGCATTGTGGGGACCATTCCTGATTTTTTTGGCAGAGACGGTCCCTTCCCTGGATTGGTTTTTTTGGCACTGTCTGGTAATTCATTGGAAGGTGTTTTGCCTACAAGTCTTTCTGGAAGTTCAATAGAGAACCTTTTGGTCAATGGGCAAAATAGCAACAATAAACTCAATGGTACCCTTGCTGTGTTACAAAACATGACATCATTGAAACAAATATGGGTCAACGATAATTCATTTACAGGTCCTATACCCGATTTATCACGGCTTAACCAACTATCTGATGTGAATTTAAGGGATAACCAGTTGACTGGTGTTGTTCCACCTTCTCTGACAAACCTTCCAAGCCTGCAAGTGGTAAATTTAACAAATAATCGTCTCCAAGGTCCACCTCCCAAGTTTAGAGACGGCGTTGGAGTTGATAATATTATCGGTGGGGGAAGAAACAAATTTTGCACAAATGTTCCAGGGCAACCATGTAGTCCTCTTGTGAATATTTTGCTATCAGTTGTCGAACCATTGGGTTATCCTCTTAAGTTTGCTGATAGTTGGCAGGGTAATGATCCTTGTGCCAATAAATGGATAGGTATAGTTTGTTTCAGTGGAAATATTTCAATTATCAATTTTCAGAACATGGGACTGAGTGGAACTATTTCTCCGAATTTTGCTAGTATTTCGTCTTTGACAAAACTACTTCTTGCAAACAATGGTATCACTGGTACCATACCTAATCAACTTACCAGTATGCCTCTTCTACAAGAATTAGATGTTTCTAATAATAATTTGTACGGCCACATGCCATCATTTCCAAAAGGTGTGGTTCTTAAAATTGGTGGGAATCCTGATATTGGGAAGGATAAACCCAGTACTCCATCTACAAGTAGCCATGAGTTTGGAAAAGACAAAGACAGAGACAACGTTGACGACGTCATTGTTGGAATTGTGTTAGGGGTTGTCTCTGTACTTGGAATCGGGGCAATATTATTTATGTTTTGGAAAAGGTCAAGGAATCATACGGAGAAAGGTAAAAAGCCTGATGCAATAACAATACATTGTAGTTATAAAGGTGGTGAAAATGTTGTGAAGGAAAATGTTGATGTTGGTGGTGAAGGAAATGACGCCTTAAGCCCCACTTGTAATGTTTACGAAGTTAGTAACATGGTGATTTCAATTCAAGTTTTGAGACAAGTTACAAATAACTTTAGTGAGGAAAAGATAGTCGGGAAAGGTGGTTTTGGTGTTGTGTACAAAGGGGAGTTGCATGATGGGACACAAATTGCAGTGAAAAGGATGCAATCAGGAATGATGGGCGAAGACGGATCAAATGAATTCACGTCGGAGATTGAAGTGCTTACAAAGGTTCGACACAAACATTTAGTTTCACTCTTAGGGTATTGTTTGGATGGGAATGAGAAACTTTTGGTTTATGAGTATATGACTAAAGCAACGGGAAGACTAACAACAAAGGCCGATGTATATAGTTTTGGTGTGGTTCTTATGGAGATCATAACAGGAAGGAAAGCACTTGATGGTAGCCAACCAGAAGAGAATATCCACCTTGTTACATGGTTTCGTAGGATGTTACTAAACAAGGATTCATTTCAATCAATGATTGATGGGACAATTGAGATTGATGAAGAAACACATGCAAGCATAAACACGGTTGCTGAGCTGGCCGGACATTGTAGTGCAAGGGAGCCTTATCAACGTCCTGACATGAGTCATGTTGTGAATGTGTTGTCATCCCTTGTTGAAGTGTGGAAGCCTACAGAACACGATGTTGATGACATATACGGGATCAACTTTGATATGACATTACCAGAAGCTCTCCAAAGGTGGCAGGCTTTTGAAGGAAGTAGCACTCTCGAGTTAACTTTTTCTCCTTCAACAATGAATACCAACGAAGGCAGCACACAAACTTATCAATCTTCAAACGCGTCTTCACATGCACAGATGTAA 2469 0.3945 MGKLELSYGGSLNFVFALVFSILVISIRCEDVEVMNILKKTINAPVTFQWTNLDVCKWKHVNCDSTKRVIAVQIGNQNLQGFLPKELVMLTTLQKFECQRNNLTGPFPYLSKSLQRLLIHDNKFSYIPNDFFTGMSNLQEVEIDNNPLPLWQIPNSLKDCVALQTFSAESVSIVGTIPDFFGRDGPFPGLVFLALSGNSLEGVLPTSLSGSSIENLLVNGQNSNNKLNGTLAVLQNMTSLKQIWVNDNSFTGPIPDLSRLNQLSDVNLRDNQLTGVVPPSLTNLPSLQVVNLTNNRLQGPPPKFRDGVGVDNIIGGGRNKFCTNVPGQPCSPLVNILLSVVEPLGYPLKFADSWQGNDPCANKWIGIVCFSGNISIINFQNMGLSGTISPNFASISSLTKLLLANNGITGTIPNQLTSMPLLQELDVSNNNLYGHMPSFPKGVVLKIGGNPDIGKDKPSTPSTSSHEFGKDKDRDNVDDVIVGIVLGVVSVLGIGAILFMFWKRSRNHTEKGKKPDAITIHCSYKGGENVVKENVDVGGEGNDALSPTCNVYEVSNMVISIQVLRQVTNNFSEEKIVGKGGFGVVYKGELHDGTQIAVKRMQSGMMGEDGSNEFTSEIEVLTKVRHKHLVSLLGYCLDGNEKLLVYEYMTKATGRLTTKADVYSFGVVLMEIITGRKALDGSQPEENIHLVTWFRRMLLNKDSFQSMIDGTIEIDEETHASINTVAELAGHCSAREPYQRPDMSHVVNVLSSLVEVWKPTEHDVDDIYGINFDMTLPEALQRWQAFEGSSTLELTFSPSTMNTNEGSTQTYQSSNASSHAQM 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05042 822 SUPERFAMILY L domain-like 336 441 - -
Mepo2g05042 822 SUPERFAMILY Protein kinase-like (PK-like) 552 760 IPR011009 -
Mepo2g05042 822 PANTHER OSJNBA0070M12.3 PROTEIN 16 652 - -
Mepo2g05042 822 Gene3D Phosphorylase Kinase; domain 1 540 648 - -
Mepo2g05042 822 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Mepo2g05042 822 Pfam Protein tyrosine and serine/threonine kinase 574 651 IPR001245 GO:0004672|GO:0006468
Mepo2g05042 822 Pfam Protein tyrosine and serine/threonine kinase 654 750 IPR001245 GO:0004672|GO:0006468
Mepo2g05042 822 MobiDBLite consensus disorder prediction 450 472 - -
Mepo2g05042 822 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Mepo2g05042 822 Pfam Leucine rich repeat N-terminal domain 340 369 IPR013210 -
Mepo2g05042 822 SUPERFAMILY L domain-like 33 305 - -
Mepo2g05042 822 Gene3D Transferase(Phosphotransferase) domain 1 650 756 - -
Mepo2g05042 822 FunFam Receptor-like kinase TMK4 29 327 - -
Mepo2g05042 822 FunFam Leucine-rich repeat receptor-like kinase 332 456 - -
Mepo2g05042 822 Gene3D Ribonuclease Inhibitor 29 324 IPR032675 -
Mepo2g05042 822 SMART LRR_typ_2 284 306 IPR003591 -
Mepo2g05042 822 SMART LRR_typ_2 419 446 IPR003591 -
Mepo2g05042 822 SMART LRR_typ_2 112 134 IPR003591 -
Mepo2g05042 822 SMART LRR_typ_2 187 210 IPR003591 -
Mepo2g05042 822 SMART LRR_typ_2 260 283 IPR003591 -
Mepo2g05042 822 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Mepo2g05042 822 MobiDBLite consensus disorder prediction 796 822 - -
Mepo2g05042 822 ProSiteProfiles Protein kinase domain profile. 571 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g05042 822 FunFam receptor protein kinase TMK1 539 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05042 Mepo-Chr2 58351680 58354817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05042 655 763 Receptor kinase-like Gene Family AT1G55610 28.440 3.19e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo2g05042 PK_Tyr_Ser-Thr 9.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05042 K00924 - gmx:100788903 830.861