Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05037 ATGGCAAACAAGTTCACCCCCATTTCAGCCATCTCTGGTGGCAAGAAAGATTTAAAGTTGATTGTTCGTGTTGCTCATATTTGGCTAATTCGTGACAAGGAAAATCCAGATGACATAATTTTCATGAACATGATGCTGGTTGATGATAAGCGAGGAAGGATACATGCTACTGTTCGTAAATACTTGGTGCCAAGTATTCAAAAAATGGTCGAAGAAGGCGGCACTTATAAGCTAGAGAATGTAATGGTTGGATTTAACGAGGGGCAGTACAAGCTTTTGCCTCACAAGCACAAGCTTAGCATGATGAACAATTCCAGATTTGTTAAGGTGAATGCACCCAATATTCCTCTGAACGTCTTTGAGTTTATGGCCTTCAAAGACATTTTACTTTCTCAAGAGGATGATAAAGTTGCTGATGTAATCGGTCATGTCGTTGAGAGGGATATTTTAAGGGAAACCGAAAAGAATGGAAGAAAAAGCATAGTAATTGATCTTACGCTAGAAGATTTGGAACACTCTAGGATTCATTGCTCCCTTTGGGGTGAATTTGCAACTGATATTGATAAGTATTTTGATGCTCAAGATAACTCTAAGCCTATTGTATTGATAATACAACTTGGCCGATTGAGGAAGTATATGGGTGCCATGGGGATCGCGAATTCATTTTATGGCTCAAAGGTCATAATAAATGGTGATCTTCCTGAGGTTTCTGACTACATTAAAAGGATGGGGAATGTTGATGTTGAACTAACACAAAGTGTTAGTCAGATGTCCTCATACAGTGCACGCCCTGTCGCTGAGGAGCTTCTTGATTGCAATCGGATGACAATCGAGGATCTTATAGAGTCCAAAGCGGCATGTAATGGATCAGTACTTGCTACCATATGTGAGATTGAAACCGGTGTCGAGTGGTTTTTCCGTTCATGCACTGTGTGTGCGTCGTTAGTCAGCCTGATTGATGGAAAACTTAGTTGCAAACGATGCAAGGAGTGCAAAAGTGCCGTTCCAAGGTTCAAGCTGCATTTAATTGTCATGGATGAGAGTGGGTCGACAACGTTTGTCCTCTTTGATCATGTTGTCACACAATTCATTGGAAGGAACGTCCAAGACTTGATTGCAGAAATGAACAAGCCTGACAACAAAGATGTGTATCCGCTTGAGTTCAACTTCTTTGTGGACAAAAAAATGTTGTTTAAGGTGGAAGTTAGTGATGGCAATGTCAATAGGAAGTGGAGAAACTATGGAGTGAAAAAAGCTACTGATGATGTTGAAATCATTGATGAGTTTATCAAGAAGTATAGTAGTAAGTTTTCTAATGAGGGAGATCAAGTTGAAACTGCACCTGAGAATACCGCTCTTGGAAGTGATGCTAATAATTTGGAAATATTGGAGTTAGGTGATTCTGTCAGCAATTCTAACAAGCTAGACACTCCATCAAGCAAATCAGGAACAAAGAGATCATCTGATGGTCATAATTCACCTGGACTTAGTAGCCTTGAAATCGGAGAGCAATTTATAAACAAGCCAACAAAGATGGTCCGTGTGAAGAGCCAAATTTTATCAGCAAAAAAATACCCAGCTGCAAGAACGCGTGCACCAGCAATGTTGGATCTCAAGTCTGCCAAATATCTTACTGATTTCGCTATGTACTCATGCCAAGATGTTGCACTATGGGAGTATCATGTTGAAGATCCTGCATTTATGCAGCTGTTGAAGATAAAATGGCGCACCTATCATGTACAGTACCACCCACATGAGGAATATTTGATTTTGGGCACAGCTCTCACAAAAGAAATCGGCAATGAGTTGAATCGATATGTTACTTTGGTCGATGCAGCACTCAATCAATTTGAGGTTGTTGTGGATAAACACGACGGAAAGCTATGTTTCACTTATGGTTTAGAAGAACTGAACAAGGCTTATAAATTAGACCAGGGCGGATGGATGTATTTGATCCATGTTCTACCACAAGTATTTGTGATTCGCGTTTACGACCGCCATGATTATGAGATTAACTATTCGATGTTTGATCCTCCTTTGAGTTTAAGACTAGACCATGCAATCTATGGTCCAGATGCATCACCAGGATCTATCCAAATTGAGGTGCCGATCCCTTATCGCCACGGCTGGAACTGCTTTAAATTTAGTGTCACTAAATGGTTGACACCTGCAGATGTTACATCTGATTATTTGACTTTCTCTTATGCCAAAGTATTTGATAGATACGTCCACAAAGATTGCAAAGACATTGGTGTTATCGACGATACAGGGCATTACTGGCTGTTCAAGGTAGAGATTCTTTTTGACAATGACGAAATCAAGTTTGGAGGAGATTGGAAGAAATTTCGTGTCACAAGGAAGCTTAACGAGTGGAAGGGAATAAGACTTGGAGCAAAAGGCGTCGGTCACAGTGTTTTGCTCTACTGCACGTTTGATTTTTAA 2442 0.4029 MANKFTPISAISGGKKDLKLIVRVAHIWLIRDKENPDDIIFMNMMLVDDKRGRIHATVRKYLVPSIQKMVEEGGTYKLENVMVGFNEGQYKLLPHKHKLSMMNNSRFVKVNAPNIPLNVFEFMAFKDILLSQEDDKVADVIGHVVERDILRETEKNGRKSIVIDLTLEDLEHSRIHCSLWGEFATDIDKYFDAQDNSKPIVLIIQLGRLRKYMGAMGIANSFYGSKVIINGDLPEVSDYIKRMGNVDVELTQSVSQMSSYSARPVAEELLDCNRMTIEDLIESKAACNGSVLATICEIETGVEWFFRSCTVCASLVSLIDGKLSCKRCKECKSAVPRFKLHLIVMDESGSTTFVLFDHVVTQFIGRNVQDLIAEMNKPDNKDVYPLEFNFFVDKKMLFKVEVSDGNVNRKWRNYGVKKATDDVEIIDEFIKKYSSKFSNEGDQVETAPENTALGSDANNLEILELGDSVSNSNKLDTPSSKSGTKRSSDGHNSPGLSSLEIGEQFINKPTKMVRVKSQILSAKKYPAARTRAPAMLDLKSAKYLTDFAMYSCQDVALWEYHVEDPAFMQLLKIKWRTYHVQYHPHEEYLILGTALTKEIGNELNRYVTLVDAALNQFEVVVDKHDGKLCFTYGLEELNKAYKLDQGGWMYLIHVLPQVFVIRVYDRHDYEINYSMFDPPLSLRLDHAIYGPDASPGSIQIEVPIPYRHGWNCFKFSVTKWLTPADVTSDYLTFSYAKVFDRYVHKDCKDIGVIDDTGHYWLFKVEILFDNDEIKFGGDWKKFRVTRKLNEWKGIRLGAKGVGHSVLLYCTFDF 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05037 813 Gene3D - 113 249 IPR012340 -
Mepo2g05037 813 MobiDBLite consensus disorder prediction 469 500 - -
Mepo2g05037 813 CDD RPA1_DBD_A_like 19 107 - -
Mepo2g05037 813 PANTHER OS03G0429900 PROTEIN 5 450 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo2g05037 813 SUPERFAMILY Nucleic acid-binding proteins 120 243 IPR012340 -
Mepo2g05037 813 Gene3D - 2 109 IPR012340 -
Mepo2g05037 813 SUPERFAMILY Nucleic acid-binding proteins 4 109 IPR012340 -
Mepo2g05037 813 Gene3D - 255 433 IPR012340 -
Mepo2g05037 813 SUPERFAMILY DNA-binding pseudobarrel domain 716 790 IPR015300 -
Mepo2g05037 813 SUPERFAMILY Nucleic acid-binding proteins 273 420 IPR012340 -
Mepo2g05037 813 CDD RPA1_DBD_C 290 423 IPR047192 -
Mepo2g05037 813 CDD RPA1_DBD_B_like 139 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05037 Mepo-Chr2 58308705 58313954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05037 1 412 Core DNA Replication Machinery Family AT5G08020 20.843 5.72e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05037 - - mtr:120577762 595.504