Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05015 ATGGCTTTTTCCTTTGGGAATGAGTTTCCAGCCAATGTTAAAGTTCTTGTGATTGATCATGATATCGATCTTCTCAATGCTATTGAGAAAACATGGTCTCAATTCAATTACCAAGTTACGACTTGCTCGACAGTTTCTTCAGCCTTGAATTTGATAGCACAAAAGGTGGATTTTGATTTGGTACTACTTGAAACTCAAATGCCGGACATGGATTCATTTGATTTCTTGCAACAATTGACACAACAAATCGATATTCCTGTCATTATGACGATGTGTTCTGAAGGATCAACAAGTGGAATAATGAAGGCAATTGAAAATGGAGCTTGTGACTGTTTTGTCAAGCCATTCACTGAAAATCAAGTAAAGTATATGTGGCATCATGCAGTTAGGAAAATGCTGAAAGGAAATAAAAAACAAAAAATCAATGAGCAATTGGGGATTGAAGGTAGCCAAATAAGGGCAAGAGATGATTCAAATTTACCCTCAAACCATGCAACATCGGAAAACGGTGACAAAGATAAACCCGAACCACCTCCAACAAAGAAGACAAAGAAGAGAAAGAAGACGAAGAAGGAGCGGGTGGTATGGTCTTTAGAGTTACATGAAAAATTCATGAAGGCTGTTAAAGAACTTGATGCTTCCACTTCCAAGGCGGTACCAAAAACAATTCTTAAACATATGAAGGTGCCCAAACTTACAAGGGAGCAGGTAGGTAGTCATCTTCAGAAGTATCGACTGTATTTAAATAAACATCAACAAGGACAAGAGCAAGCTCTCATGGTTGCGGGATCCGACAGTTCACATGATAGATCTTCACAACTTTATTTTCAAGCTTATGATGCTTCTGCTCATGCTATTGTATTGAAATCATCACAGTGGTCTCACAATTCTCATGATGCAGAACAACAATATCAAATGGCATATGGTTGTAGTTCTCAACAAGTACCCAGAAAATTGATACCAAGGCATTTTCCTCATCAGCCCAACACCAACCTACATCATGGATATGCAACATGGGAGCAACAACTTCCAATTGAATATTATATAGCTGATCATGATCATGCAATTGGTCTTGGAAACTTGATAACGAATAATAGTAATGCATTGCCTCAGCAACAAGAACATCATAATCCACAACAATCACCAATGCATGTTTCTCAGATGAATAATGCAGTTAATGATGTTGTACCGAGTATGGACAACATTGTGGAAGCGAATAATACTATAACAGATTTGGGTGAAGCTACAAGGCAAGTGGAGGCTAGTCCTCAAGTTCAAGAGCTAGGAAGGGTGTTGGCTGCTCCTCAAGCTCAGCCTCAAGAGCTAGGAAGGGTGGTGGCTGGTCCTCAAGCTCAAGAGCTAGGAAGGGTGGTGGCTGCTCCTCAAGATCAAGAGCTAAGAAGGGTGGTGACTGCTCCTCAGGCTCAACCTCAAGAGCTAGGAAGGGCGGTGGCTGCTCCTCAGGGTCAACCTCAAGAGCCAAGAAGGGTGGTGGCTAGTCCTCGGGTTCAAGAGCTAGGAATGGTGGTGGCTGCTCCTCAAGCTCAGCCTCAAGAGCTAGGAAGGGCGGTGGCTGGTCCTCAGGTTCAAGAGCTAGGAAGGGTGCCTCAAGAGCTAGGAAGGGCAGTGGCTGCTCCTCAGGCTCAACCTCAAGAGCTAGGAAGGATGGTCGCTGGCCCTCAGGTTCAAGAGTTGGGAAGGGTGTTGGCTGCTCCTCAAGCTCAGCCTCAAGAGCTAGGAAGGGTGGTGGTTGGTCCTCAGGTTCAAGATTTAGGAAGGGTGCCTCAAGAGCTAGGAAGGGCGGTGACTGCTCCTCAGGCTCAACCTCATGAGCTAGGAAGAGTGGTCGCTGGTCCTCAGGTTCAAGAGCTAGGAAGGGTGTTGACTGCTCCTCAAGCTCAGCCTCAAGAGCGAGGAAGGGAGGTGGCTGGTCCTCAAGTTCAAGAGCTAGGAAGGGTGCCTCAAGAGCTAGGAAGGGTGGTGACTGCTCTTCATGCTCAACCTCAAAAGCTAGGAAGGGGTGGTGGTTGGTCCTCAGGTTCAAGAGCTAGGAAGGGTGCTGGCTGCTCCTCAACCTCAACCTCAAGAGTTAGGAAGGGCGGTGGTTGCTCCACAGGCTCAACCTCAAGAGCTAGGAAGGGAGGTGGTTGGTCCTCAGGCTCAACCTCAAGAGCTAGGGTGGTGGCTGCTCCTCAGGCTCAAGAGCTAGGAAGGGTGGTAGCTGCTCCTCAGACTCAACCTCAAGAGCTAGGAAGGGGAAAGAGGGGTAAGTTCCCTAACCAAAGATATGCCAATTGA 2298 0.4626 MAFSFGNEFPANVKVLVIDHDIDLLNAIEKTWSQFNYQVTTCSTVSSALNLIAQKVDFDLVLLETQMPDMDSFDFLQQLTQQIDIPVIMTMCSEGSTSGIMKAIENGACDCFVKPFTENQVKYMWHHAVRKMLKGNKKQKINEQLGIEGSQIRARDDSNLPSNHATSENGDKDKPEPPPTKKTKKRKKTKKERVVWSLELHEKFMKAVKELDASTSKAVPKTILKHMKVPKLTREQVGSHLQKYRLYLNKHQQGQEQALMVAGSDSSHDRSSQLYFQAYDASAHAIVLKSSQWSHNSHDAEQQYQMAYGCSSQQVPRKLIPRHFPHQPNTNLHHGYATWEQQLPIEYYIADHDHAIGLGNLITNNSNALPQQQEHHNPQQSPMHVSQMNNAVNDVVPSMDNIVEANNTITDLGEATRQVEASPQVQELGRVLAAPQAQPQELGRVVAGPQAQELGRVVAAPQDQELRRVVTAPQAQPQELGRAVAAPQGQPQEPRRVVASPRVQELGMVVAAPQAQPQELGRAVAGPQVQELGRVPQELGRAVAAPQAQPQELGRMVAGPQVQELGRVLAAPQAQPQELGRVVVGPQVQDLGRVPQELGRAVTAPQAQPHELGRVVAGPQVQELGRVLTAPQAQPQERGREVAGPQVQELGRVPQELGRVVTALHAQPQKLGRGGGWSSGSRARKGAGCSSTSTSRVRKGGGCSTGSTSRARKGGGWSSGSTSRARVVAAPQAQELGRVVAAPQTQPQELGRGKRGKFPNQRYAN 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05015 765 Gene3D - 187 251 - -
Mepo2g05015 765 MobiDBLite consensus disorder prediction 146 192 - -
Mepo2g05015 765 MobiDBLite consensus disorder prediction 665 765 - -
Mepo2g05015 765 SUPERFAMILY CheY-like 12 145 IPR011006 -
Mepo2g05015 765 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 291 IPR045279 GO:0009736
Mepo2g05015 765 FunFam Two-component response regulator 187 252 - -
Mepo2g05015 765 Pfam Response regulator receiver domain 15 121 IPR001789 GO:0000160
Mepo2g05015 765 CDD REC_typeB_ARR-like 15 129 - -
Mepo2g05015 765 SUPERFAMILY Homeodomain-like 189 250 IPR009057 -
Mepo2g05015 765 MobiDBLite consensus disorder prediction 684 728 - -
Mepo2g05015 765 Gene3D - 9 136 - -
Mepo2g05015 765 NCBIfam myb-like DNA-binding domain, SHAQKYF class 191 246 IPR006447 GO:0003677
Mepo2g05015 765 MobiDBLite consensus disorder prediction 473 496 - -
Mepo2g05015 765 SMART REC_2 13 125 IPR001789 GO:0000160
Mepo2g05015 765 Pfam Myb-like DNA-binding domain 193 245 IPR001005 -
Mepo2g05015 765 ProSiteProfiles Response regulatory domain profile. 14 129 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05015 Mepo-Chr2 58124183 58127797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05015 7 265 Response Regulator Gene Family AT2G25180 35.206 4.42e-39 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo2g05015 Response_reg 3.6e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05015 - - mtr:11416746 976.852