Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05010 ATGCCTGTTGTTACATGGGGTGTGATTCAAGGTCGCAAAGAGAAACTCGTTTCGCGGGTCATCATCTTCGATTATCTCAAGGGTTTGGGAATTATTCCTGACGAATTGCAGGATTTCGAGCTTCCTTCAACCGTTGAAGTTATGAGGAAACGTGTTGAGTTTATTCAGAAATTGGGGTTAAAGATTGATGATATAAATCAGTATCCTTTGATTTTGGGTTGTAGTCTTAGAAAAAATATGATTCCTGTTTTAGATGATATTGGGTTTGTGTTGCAAAAATATCCTGAACTTTTAGGGTTTAAGCTTGAAGGTACTTTGAGTACTTCAGTAGCTTATCTTGTTAGTATTGGTGTTAATCCTAGGGATATTGGTCCAATGGTTACACATCATCCTTATTTTTTAGGAATGAGAGTTGGTACTATGATAAAGCCTTTTGTTGATTACTTGGTTGATTTAGGGTTGCCTAAGAAGATTCTAGCTAGGATGTTGGAGAAAAGAGCTTATTTACTTGGCTATGATCTTGAAGAGACTGTGAAACCTAATGTTGATTGTTTGATTAGTTTTGGTTTGAGGAGGGAATGTTTGCCTTCGGTTATTGCTCAGTATCCACAAATTATTGGGTTGCCTCTTAAGGCTAAATTGTCTTCACAACACTATTTTTTCAGTTTGAAGCTTAAGATTGATCCGGAAGGGTTTGCGAGGGTGGTGGAGAAGATGCCACAGGTGGTTAGTCTTCATCAAAATGTGATTATGAAACCGGTTGAGTTTTTACTCGGTAGGGCAATACCGTCGCAGGATGTGGCTAGTATGGTGATCAAGTGTCCTCAATTGATTGTGCTGCGAGTTGAGCTCATGAAGAACATTTATTACTTCTTCAAAAGTGAGATGGGGAGGCCCGTAAATGAGCTTGTGGAATTTCCAGAATACTTCACTTATAGTTTGGAATCAAGGATTAAACCTAGACACCAGAGGCTCACGAGCAAGGGGATAAAATGTTCGTTGAATTGGATGCTGAATTGTAGTGACAAGAGATTTGAAGAGAGATTGCCGGGCAATTATATCGAAACCAAAAGTATAGGTCCTTCATTCCGTATTGGTGGGAAATTAGAGCTACCAGGAAACGATATAGTTTCAGGTGAGGAAGAGGAGAGTGACGATGAAATGCTATACAGAAGAACGATTTCTCTTTAG 1191 0.3913 MPVVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELQDFELPSTVEVMRKRVEFIQKLGLKIDDINQYPLILGCSLRKNMIPVLDDIGFVLQKYPELLGFKLEGTLSTSVAYLVSIGVNPRDIGPMVTHHPYFLGMRVGTMIKPFVDYLVDLGLPKKILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRRECLPSVIAQYPQIIGLPLKAKLSSQHYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIPSQDVASMVIKCPQLIVLRVELMKNIYYFFKSEMGRPVNELVEFPEYFTYSLESRIKPRHQRLTSKGIKCSLNWMLNCSDKRFEERLPGNYIETKSIGPSFRIGGKLELPGNDIVSGEEEESDDEMLYRRTISL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05010 396 Gene3D Transcription termination factor 3, mitochondrial 139 356 IPR038538 -
Mepo2g05010 396 FunFam Transcription termination factor MTERF4, chloroplastic 138 354 - -
Mepo2g05010 396 PANTHER CGI-12 PROTEIN-RELATED 254 348 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 196 228 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 88 119 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 160 191 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Mepo2g05010 396 Pfam mTERF 86 346 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05010 Mepo-Chr2 58093028 58094356 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo2g05010 mTERF 2.4e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g05010 K15032 - gmx:100809590 655.981