Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g05008 | ATGGCTGAACGTGGTGGAGACCGTGGTGGTTTTGGCAGTGGTTTTGGAGGACGTGGTGGTGACAGAGGAGGTCGTGGTGGACGTGGTGACAGAGGTCGTGGTGGTCGTCGTAGAGCTGGAGGTAGACGCGAAGAAGAAGAGAAATGGGTTCCAGTGACCAAGCTAGGTCGTCTCGTGAAGGAAGGTAAGATCCGAAGCCTTGAACAGATCTATCTTCATTCTCTCCCAATCAAGGAGCACCAAATCATTGATACCCTCGTGGGTCCCACTCTGAAGGATGAGGTGATGAAGATCATGCCGGTTCAGAAACAAACCCGGGCTGGTCAGAGAACCCGGTTCAAGGCTTTTGTTGTCGTTGGTGACAACAATGGTCACGTTGGTCTTGGTGTGAAGTGTAGCAAAGAAGTAGCTACTGCTATTCGTGGTGCTATTATCTTGGCTAAGCTGAGTGTGATTCCAGTGAGGAGAGGTTATTGGGGTAACAAGATCGGAAAGCCACACACTGTTCCTTGTAAGGTTACTGGAAAGTGTGGTTCTGTTACTGTTCGCATGGTTCCTGCTCCTCGTGGTTCTGGTATTGTTGCTGCTAGGGTTCCCAAGAAGGTTTTGCAGTTTGCTGGTATTGATGATGTTTTCACTTCCTCTAGGGGATCCACCAAAACCCTTGGAAATTTCGTCAAGGCCACTTTTGACTGTTTGATGAAAACCTACGGTTTTCTGACACCTGAGTTCTGGAAGGAGACAAGGTTCTCCAAATCTCCATTCCAAGAGTATACCGATTTGTTGGCCAAGCCAACTGCAAAGGCTTTGATCCTTGAGGAAGAAAGGGTGGAGGCTTGA | 840 | 0.4881 | MAERGGDRGGFGSGFGGRGGDRGGRGGRGDRGRGGRRRAGGRREEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTAKALILEEERVEA | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g05008 | 279 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Mepo2g05008 | 279 | PANTHER | RIBOSOMAL S SUBUNIT | 43 | 237 | IPR000851 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g05008 | 279 | Gene3D | - | 154 | 247 | IPR014721 | - | |
Mepo2g05008 | 279 | Pfam | Ribosomal protein S5, N-terminal domain | 91 | 155 | IPR013810 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g05008 | 279 | NCBIfam | 30S ribosomal protein S5 | 44 | 251 | IPR005711 | GO:0003735|GO:0006412|GO:0015935 | |
Mepo2g05008 | 279 | MobiDBLite | consensus disorder prediction | 23 | 47 | - | - | |
Mepo2g05008 | 279 | FunFam | 40S ribosomal protein S2 | 48 | 153 | - | - | |
Mepo2g05008 | 279 | Gene3D | - | 48 | 153 | - | - | |
Mepo2g05008 | 279 | FunFam | 40S ribosomal protein S2 | 154 | 247 | - | - | |
Mepo2g05008 | 279 | Pfam | Ribosomal protein S5, C-terminal domain | 175 | 247 | IPR005324 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g05008 | 279 | ProSiteProfiles | S5 double stranded RNA-binding domain profile. | 91 | 154 | IPR013810 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g05008 | 279 | ProSitePatterns | Ribosomal protein S5 signature. | 108 | 140 | IPR018192 | - | |
Mepo2g05008 | 279 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 167 | 247 | IPR020568 | - | |
Mepo2g05008 | 279 | SUPERFAMILY | dsRNA-binding domain-like | 87 | 156 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g05008 | Mepo-Chr2 | 58069302 | 58071505 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g05008 | 45 | 265 | Cytoplasmic Ribosomal Protein Gene Family | AT3G57490 | 92.308 | 5.66e-153 | 426 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g05008 | K02981 | - | gmx:100797105 | 479.944 |