Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g04993 | ATGGCAGACGTTGAGGTAGATGCAGCAGCAGCCGCCGCCGGAGTACCGAAGAAGAGAACATTCAAGAAGTTCAGTTTCAGAGGAGTCGATTTGGATGCACTTCTTGACATGTCCACTGATGAGCTTGTTAAGCTCTTCAGTGCTCGTGCTCGTAGAAGGTTCCAGAGAGGTCTCACTCGTAAGCCCATGGCTCTCATCAAAAAGCTTCGCAAAGCGAAAAGGGAGGCACCACCTGGTGAGAAGCCAGAACCTGTTAGGACCCATCTTCGTAACATGATCATTGTACCTGAGATGATTGGGAGCATTATTGGAGTGTACAACGGGAAGACCTTTAACCAGGTTGAAATCAAACCTGAGATGATCGGTCATTACCTTGCTGAATTCTCAATTTCATACAAGCCTGTTAAGCATGGTAGACCTGGTATTGGTGCTACTCACTCCTCCAGGTTCATTCCTCTCAAGTGA | 465 | 0.4753 | MADVEVDAAAAAAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g04993 | 154 | Hamap | 30S ribosomal protein S19 [rpsS]. | 50 | 143 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | Gene3D | 30s Ribosomal Protein S19; Chain A | 11 | 154 | IPR023575 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | PRINTS | Ribosomal protein S19 family signature | 107 | 119 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | PRINTS | Ribosomal protein S19 family signature | 87 | 106 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | PRINTS | Ribosomal protein S19 family signature | 119 | 134 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | FunFam | 40S ribosomal protein S15 | 11 | 154 | - | - | |
Mepo2g04993 | 154 | SUPERFAMILY | Ribosomal protein S19 | 57 | 138 | IPR023575 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | PANTHER | RIBOSOMAL PROTEIN S19P FAMILY MEMBER | 12 | 154 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | PIRSF | RPS19p_RPS19a_RPS15e_RPS19o | 11 | 154 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04993 | 154 | ProSitePatterns | Ribosomal protein S19 signature. | 107 | 131 | IPR020934 | GO:0003723 | |
Mepo2g04993 | 154 | NCBIfam | 30S ribosomal protein S19 | 21 | 154 | IPR005713 | GO:0003735|GO:0006412|GO:0015935 | |
Mepo2g04993 | 154 | Pfam | Ribosomal protein S19 | 52 | 137 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g04993 | Mepo-Chr2 | 57975991 | 57977761 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g04993 | 1 | 154 | Cytoplasmic Ribosomal Protein Gene Family | AT5G09500 | 87.662 | 1.94e-94 | 268 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g04993 | K02958 | - | gmx:100499657 | 288.115 |