Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04990 ATGAAAGCCTTTGTGTTGAAAAAAAGACGCGAACTCATTGAAATTGTATCAGAGGTTGATGATAAACTTTCTGAAGCTCTTCGTGGTGGCAGCCAAATTCCAGAGTCTTATCTCGATGATGCAATTCATAGGGCAACTATAGCAAGGAAATTTGTGCCAATTATCATCAGTGATGAGAGATATGAAGGGTTACAACTATTTAAGGAGGGTGTAATTAGGTATTTGCCAAGTCCAATCGATGTTAGTAATTATGCTCTTGATCAAAATAGGAAAGGTGAGAAAATTGAATTGTCTGGAAGTATTGATGCACCATTTGTTGCAAAGGCTTTCGCAAATTGGCATAGGACGTATTTAAAATTAACTTATCTAAGAATCTATCAGGGTGTTATTAAGAAGGGTGATTTTATTACAAATGTTAACACTGGTGAGAAGATTCTGATTCCTCGTTTGGGTAAGAGACATGACGATCTGATTGAGGATCTTGATGAAGCTCATGCTGGAGAAATTGTTTTTGTGTTTGATGCTCATCTTGAATCTGGAGATACTTTTACCGATGGGTCTGTTAGATATACAATGACTTCTGCCGATGTTCCTGCTTATTCGGTCTCAAAAGATTCTGGAGAGAAATTTTCAAATGGTAAAAGAGAGGCACCACCTTGTGAGAAGCCAGAACCTGTTAGGATCCATCTTCGTAACATGATCATTGTACCTGAGATGATTGGGAGCATTATTGGAGTGTATAATGGGAAGACCTTTAACCAGGTTGAAATCAAACCTGAGATGATTGGTCATTACCTTGCCGAATTCTCGATTTCATACAAGCCTGTTAAGAATGGTAGACCTGGTATTGGTACTACTTACTCCTCCAGGTTCATTGCTCTCAAGTGA 888 0.384 MKAFVLKKRRELIEIVSEVDDKLSEALRGGSQIPESYLDDAIHRATIARKFVPIIISDERYEGLQLFKEGVIRYLPSPIDVSNYALDQNRKGEKIELSGSIDAPFVAKAFANWHRTYLKLTYLRIYQGVIKKGDFITNVNTGEKILIPRLGKRHDDLIEDLDEAHAGEIVFVFDAHLESGDTFTDGSVRYTMTSADVPAYSVSKDSGEKFSNGKREAPPCEKPEPVRIHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKNGRPGIGTTYSSRFIALK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04990 295 Gene3D Translation factors 84 198 - -
Mepo2g04990 295 Gene3D - 1 82 IPR027417 -
Mepo2g04990 295 SUPERFAMILY Ribosomal protein S19 213 279 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 Hamap 30S ribosomal protein S19 [rpsS]. 122 284 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 212 - -
Mepo2g04990 295 Gene3D 30s Ribosomal Protein S19; Chain A 200 282 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 FunFam Elongation factor G, mitochondrial 87 200 - -
Mepo2g04990 295 SUPERFAMILY Translation proteins 62 191 IPR009000 -
Mepo2g04990 295 PRINTS Ribosomal protein S19 family signature 260 275 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 PRINTS Ribosomal protein S19 family signature 248 260 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 PRINTS Ribosomal protein S19 family signature 228 247 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 Pfam Ribosomal protein S19 218 277 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mepo2g04990 295 ProSitePatterns Ribosomal protein S19 signature. 248 272 IPR020934 GO:0003723
Mepo2g04990 295 Pfam Elongation factor Tu domain 2 121 183 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04990 Mepo-Chr2 57966605 57968686 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04990 208 295 Cytoplasmic Ribosomal Protein Gene Family AT5G09510 85.227 2.74e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04990 K02355 - mtr:11414489 365.925