LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g04957	ATGGGAGATGGTTTCATAGCTAAGGACATGACCTTTGAGAACACAGCAGGACCCCAAAAACACCAAGCAGTAGCTCTCCGTTCCGGCGCCGATCACTCTGTTTTCTACCGTTGTGCCTTCAAAGGCTACCAAGACACCTTATACGTTTACGCCAACCGTCAATTCTACCGTGACTGCAACATCTATGGAACAATTGATTTCATCTTTGGTAACGCCGTTACTGTCCTTCAAAACTGCAACATCTTCGTCAGAAAACCAATGAGCAACCAACAAAACACCGTAACGGCACAAGGAAGAACAGATCCAAATGAAAACACAGGAATTGTAATACATAACTGCCGTATAACTGCATCAACTGATTTGAAACCGGTTCAGAATTCAGTAAAAACATATCTTGGTAGACCATGGCAGAAATATTCAAGAACGGTTATTATGAAAAGTAATCTTGATGGTTTAATAAATTCACAAGGTTGGGCTCCATGGATGGGTGGTTTTGCTTTGAGTACACTTTACTATGGTGAATATATGAATGTTGGTGGTGGTGCTAATACGGGTGGAAGAGTTAAATGGCAAGGATTTCATGTTATTACTAATCCTTCTGAGGCAGTTAAATTTTCTGTTGGTAATTTTTTGGCTGGTGATTCTTGGATTTCTGGTAGTGGTGTGCCGTTTGATGCAGGTTTGTGA	687	0.4105	MGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGYQDTLYVYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSNQQNTVTAQGRTDPNENTGIVIHNCRITASTDLKPVQNSVKTYLGRPWQKYSRTVIMKSNLDGLINSQGWAPWMGGFALSTLYYGEYMNVGGGANTGGRVKWQGFHVITNPSEAVKFSVGNFLAGDSWISGSGVPFDAGL	228

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g04957	228	Gene3D	-	1	228	IPR012334	-
	Mepo2g04957	228	SUPERFAMILY	Pectin lyase-like	2	227	IPR011050	-
	Mepo2g04957	228	ProSitePatterns	Pectinesterase signature 2.	61	70	IPR033131	-
	Mepo2g04957	228	PANTHER	PECTINESTERASE	2	218	-	-
	Mepo2g04957	228	Pfam	Pectinesterase	1	214	IPR000070	GO:0030599\|GO:0042545
	Mepo2g04957	228	FunFam	Pectinesterase 4	1	228	-	-

Showing 1 to 6 of 6 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g04957	Mepo-Chr2	57715424	57716423	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g04957	1	228	Carbohydrate Esterase	AT2G45220	65.789	9.12e-111	325

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g04957	-		-	lja:Lj4g3v3099630.1	429.869

Showing 1 to 1 of 1 entries