Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04957 ATGGGAGATGGTTTCATAGCTAAGGACATGACCTTTGAGAACACAGCAGGACCCCAAAAACACCAAGCAGTAGCTCTCCGTTCCGGCGCCGATCACTCTGTTTTCTACCGTTGTGCCTTCAAAGGCTACCAAGACACCTTATACGTTTACGCCAACCGTCAATTCTACCGTGACTGCAACATCTATGGAACAATTGATTTCATCTTTGGTAACGCCGTTACTGTCCTTCAAAACTGCAACATCTTCGTCAGAAAACCAATGAGCAACCAACAAAACACCGTAACGGCACAAGGAAGAACAGATCCAAATGAAAACACAGGAATTGTAATACATAACTGCCGTATAACTGCATCAACTGATTTGAAACCGGTTCAGAATTCAGTAAAAACATATCTTGGTAGACCATGGCAGAAATATTCAAGAACGGTTATTATGAAAAGTAATCTTGATGGTTTAATAAATTCACAAGGTTGGGCTCCATGGATGGGTGGTTTTGCTTTGAGTACACTTTACTATGGTGAATATATGAATGTTGGTGGTGGTGCTAATACGGGTGGAAGAGTTAAATGGCAAGGATTTCATGTTATTACTAATCCTTCTGAGGCAGTTAAATTTTCTGTTGGTAATTTTTTGGCTGGTGATTCTTGGATTTCTGGTAGTGGTGTGCCGTTTGATGCAGGTTTGTGA 687 0.4105 MGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGYQDTLYVYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSNQQNTVTAQGRTDPNENTGIVIHNCRITASTDLKPVQNSVKTYLGRPWQKYSRTVIMKSNLDGLINSQGWAPWMGGFALSTLYYGEYMNVGGGANTGGRVKWQGFHVITNPSEAVKFSVGNFLAGDSWISGSGVPFDAGL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04957 228 Gene3D - 1 228 IPR012334 -
Mepo2g04957 228 SUPERFAMILY Pectin lyase-like 2 227 IPR011050 -
Mepo2g04957 228 ProSitePatterns Pectinesterase signature 2. 61 70 IPR033131 -
Mepo2g04957 228 PANTHER PECTINESTERASE 2 218 - -
Mepo2g04957 228 Pfam Pectinesterase 1 214 IPR000070 GO:0030599|GO:0042545
Mepo2g04957 228 FunFam Pectinesterase 4 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04957 Mepo-Chr2 57715424 57716423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04957 1 228 Carbohydrate Esterase AT2G45220 65.789 9.12e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04957 - - lja:Lj4g3v3099630.1 429.869