Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04956 ATGGATAAACTCATATTCAACTTTTGCATTGCATACTTTCTTCTTTTTTCTCTCTTGTTTGTGCATGGCAAAGAATTGTCATGCAATCAAACTCCATACCCTCATGTGTGCAACCATTATATTGGAACCAACACAAATAAACTATCAACCCTAGATTCTTCTTCTTCCTTCCATGATATTGCACTTAAGGTTACCTTGGACCAAGCCATTGAAGCACACAAACTTGTATCAACCATGGAATTAAATAATTTCAAAGACAAGCATGCCAAATCAGCATGGGAGGATTGTTTAGAGCTTTATGAGGATACAATTTATCAACTCAAACGCTCAATAAACTCAAACAATCTAAATGACAAATTAACTTGGCAAAGTGCTTCCATTACCAATCATCAAACTTGCCAAAATGGTTTCATTGATTTCAACCTTCCATCTCACTTAAACTACTTCCCATCCATGTTAAGCAACTTCACTAAATTGCTTAGCAATTCTTTGTCCATTAGCAACACTCTAACTTCATCACAATCATCCTCATCCTCATCATCAAGTACTAAACAAAATGGAGGAAGAAGGTTGTTATCAGATAAATTTCCATCCTGGCTTTTAGGGTCAGATAGAAAGCTTCTTCAGGCAACACCGGGGTCAGGGACAGGACCAAGTGCTGATATTGTGGTTGCACAAGATGGAAGTGGGAACTATAAGACAATATCTGAGGGTGTGGCTGCAGCTGCTAAGCTTAGTGGAAAAGGGAGAGTTGTTATTCATCTGAAAGCAGGTGTTTATAAAGAGAATATTGATATCAAAAGGACAGTGACAAACTTAATGATATTTGGAGATGGAATGGATTCTACTATTGTTAGTGGTAATCAAAATGCTATAGATGGTTCTACTACTTTTCGTTCAGCTACTTTTGCTGTTATGGGAGATGGTTTCATAGCTAAGGACATGACCTTTGAGAACACAGCAGGACCCCAAAAACACCAAGCAGTAGCTCTCCGTTCCGGCGCCGATCACTCTGTTTTCTACCGTTGTGCCTTCAAAGGCTACCAAGACACCTTATATGCATATGCCAACCGTCAATTCTACCGTGACTGCAACATCTATGGAACAATTGATTTCATCTTTGGTAACGCCGTTACTGTCCTTCAAAACTGCAACATCTTTGTTAGAAAACCAATGAGCTACCAACAGAACACTGTAACAGCACAGGGAAGGACAGATCCAAATGAAAACACAGGAATTGTGATTCATAACTGCCGTATAACCGCAGCAAGTGATTTGAAACCGGTTCAGAATTCAATCAAAACATATCTTGGGAGACCATGGCAGAAATATTCAAGAACAGTTGTTATGAAAAGTAATATTGATGGTTTGATAAATTCACAAGGTTGGGCTCCATGGATGGGTGGTTTTGCTTTGAGTACACTTTACTATGGTGAATATATGAATGTTGGTGGTGGTGCTAATACTGATGGAAGAGTTGAATGGCCTGGTTTTCATGTTATTACTAATCCCTCTGAGGCTGGTAAATTTTCTGTTGGTAATTTTTTGGCTGGTGATTCTTGGATTTCTGGTAGTGGTGTGCCCTTTGATGCAGGTTTGTGA 1602 0.3901 MDKLIFNFCIAYFLLFSLLFVHGKELSCNQTPYPHVCNHYIGTNTNKLSTLDSSSSFHDIALKVTLDQAIEAHKLVSTMELNNFKDKHAKSAWEDCLELYEDTIYQLKRSINSNNLNDKLTWQSASITNHQTCQNGFIDFNLPSHLNYFPSMLSNFTKLLSNSLSISNTLTSSQSSSSSSSSTKQNGGRRLLSDKFPSWLLGSDRKLLQATPGSGTGPSADIVVAQDGSGNYKTISEGVAAAAKLSGKGRVVIHLKAGVYKENIDIKRTVTNLMIFGDGMDSTIVSGNQNAIDGSTTFRSATFAVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGYQDTLYAYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSYQQNTVTAQGRTDPNENTGIVIHNCRITAASDLKPVQNSIKTYLGRPWQKYSRTVVMKSNIDGLINSQGWAPWMGGFALSTLYYGEYMNVGGGANTDGRVEWPGFHVITNPSEAGKFSVGNFLAGDSWISGSGVPFDAGL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04956 533 MobiDBLite consensus disorder prediction 170 189 - -
Mepo2g04956 533 MobiDBLite consensus disorder prediction 170 191 - -
Mepo2g04956 533 CDD PMEI-like_3 26 171 - -
Mepo2g04956 533 SMART complete 255 436 IPR006633 -
Mepo2g04956 533 Pfam Pectinesterase 221 519 IPR000070 GO:0030599|GO:0042545
Mepo2g04956 533 SMART PMEI_2 16 166 IPR006501 GO:0004857
Mepo2g04956 533 Pfam Plant invertase/pectin methylesterase inhibitor 27 166 IPR006501 GO:0004857
Mepo2g04956 533 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Mepo2g04956 533 FunFam Pectinesterase 216 533 - -
Mepo2g04956 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 172 IPR035513 -
Mepo2g04956 533 SUPERFAMILY Pectin lyase-like 215 532 IPR011050 -
Mepo2g04956 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 171 IPR035513 -
Mepo2g04956 533 NCBIfam pectinesterase inhibitor domain 8 171 IPR006501 GO:0004857
Mepo2g04956 533 Gene3D - 217 533 IPR012334 -
Mepo2g04956 533 PANTHER PECTINESTERASE 18 523 - -
Mepo2g04956 533 FunFam Pectinesterase 25 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04956 Mepo-Chr2 57710418 57713310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04956 27 533 Carbohydrate Esterase AT1G23200 53.571 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04956 - - lja:Lj4g3v3099630.1 818.535