Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04953 ATGAGAACCCTTTTCATTATATTATTCACCATTATTTTCTTCTCAACAATTTTGCCACAATCCAACTCTCAAAAAAATGACACTTTTTCTACTTGCAATCAATCATATTTCACATGTGGAACAAACACAAATGTATCATTTCCTTTCTGGGGAAAGAACCGACCAAATATTTGTGGCAAAAATGAGTTCAAACTCACTTGCATGCATAACCAAAACACTTGTATTCAAATTGGTTCACAAAAGTTCAATGTACTAAACATTAACCAAACAGCTTCAACCATGAAAATTGTTAGAACAAATCTTGTCAATGATATTTGTTCTTCAAATTTCACCAACACTTCTTTGAATGGAAGTCCCTTTACTTATCTTCCAAATGTTCAGAATCTCACTGTATTCTATAATTGTCCCATTGAAAATAGTTCAATTATTGGAAAAAACATAAACAGTTTTACGTGTGAGAATAATGGTAGCAATAAACATGTTTTCTACGTGGTGAAGAATGAAACTCAGCTACAAAACCAATTCTCAAACCTTCAGAACTGTGGGGCTAGTGTTCAAGTGCAAGTTTCTATGGATGGTGTTTCTGAGAGTGGGGTTGAAGCACTTCAACAAGGATTTGATGTGAAGTATGATGAAGGTGCAGGGTGGTCCTCAGAGTGTGAAGTGTGTAGGGAATCTGGAGGAACATGTGGTACCAATCAGAATGATTCTTCTCATTTTTCTTGTTATTGTCCTGGTGGAACTCATCATGCTGTTCAATGTTCTGCTCACAAAAGTAGCAAAAAGAACAAAGTGTTGAAACTGGTTATAGGTTTCGTTGGTACTGGAATGTTACTACCTCTTATTGCTGTCATAATATGCCGAAATAAAGCAAAGATATGGAAGGTTATAAAAACACAATTCAGCAAAATAACAAGGAACAATCAGCATATAGAAGACTTCCTTGAAAGTCAAGGTCCTCTGAATATAAAAAGATACAATTACTCTGATATAAAGAAAATGACTGAATCCTTCAAAGTTAAACTAGGAGAGGGTGGTTATGGTTCTGTATACAAAGGAAAATTGATCAATGGTGGTTCTGTGGCTGTAAAAGTATTGAGTGAGTCAAAAGGGAGCGGTGAAGATTTCATCAATGAAGTAGCAAGTATATGCAAAACATCTCATGTTAATGTTGTCTCTCTTTTAGGATTTTGTCTTGATGGAACAAAAAAAGCTCTCATCTATGAGTTTATGTCCAATGGTTCACTTGAAAAGTTCATTCAAAGTCACAACAAAGAATCCGAAAAGGAGGAAAAGACTAAGACTAGTCCTTCATTGAGTTGGGAGAATTTACACCAGATTGCGGTAGGGATAGCTCGAGGACTAGAGTACTTGCATAAAGGATGCAACACTAGGATTCTTCATTTCGACATTAAACCACATAACATTCTTTTAGACGAAACTTACTGTCCCAAGATATCTGATTTTGGACTTGCTAAACTAAGCACAAGGGATGACAGCATTATTTCAATGTCAAATGCTAGAGGGACGGTTGGATATGTTGCTCCTGAAGTTTTCAACAAAAGTTTCGGAGGCGTTTCACATAAGTCTGATGTCTATAGTTACGGAATGATGTTGCTAGAAATGGTTGGTGGACGGAAGAACGTTAACATCGTTGAAGCTAGTCATTCGAGCGAGTTATATTTTCCACATTTAGTGATCTATAAGAAGCTTGAGAAGGGAAATGATTTGGAACTTGATGAAGGGGTAATGTCTAATGAGGAAAATGAGATAGCTAAGAAGTTGACTATGGTTGGTTTGTGGTGCATTCAAACAATTCCTACTCATAGACCTACAATAAGTAAAGTTATTGATATGTTGGAAGGTACCATGGATTCTTTGGAAATGCCACCAAAACCTGTTATGTTTTCTCCTCCAAGATCAATACCAGAATTTTCTACTTCATCAAAATCATTGGAAAGCTTCTCTAACTAA 1974 0.3597 MRTLFIILFTIIFFSTILPQSNSQKNDTFSTCNQSYFTCGTNTNVSFPFWGKNRPNICGKNEFKLTCMHNQNTCIQIGSQKFNVLNINQTASTMKIVRTNLVNDICSSNFTNTSLNGSPFTYLPNVQNLTVFYNCPIENSSIIGKNINSFTCENNGSNKHVFYVVKNETQLQNQFSNLQNCGASVQVQVSMDGVSESGVEALQQGFDVKYDEGAGWSSECEVCRESGGTCGTNQNDSSHFSCYCPGGTHHAVQCSAHKSSKKNKVLKLVIGFVGTGMLLPLIAVIICRNKAKIWKVIKTQFSKITRNNQHIEDFLESQGPLNIKRYNYSDIKKMTESFKVKLGEGGYGSVYKGKLINGGSVAVKVLSESKGSGEDFINEVASICKTSHVNVVSLLGFCLDGTKKALIYEFMSNGSLEKFIQSHNKESEKEEKTKTSPSLSWENLHQIAVGIARGLEYLHKGCNTRILHFDIKPHNILLDETYCPKISDFGLAKLSTRDDSIISMSNARGTVGYVAPEVFNKSFGGVSHKSDVYSYGMMLLEMVGGRKNVNIVEASHSSELYFPHLVIYKKLEKGNDLELDEGVMSNEENEIAKKLTMVGLWCIQTIPTHRPTISKVIDMLEGTMDSLEMPPKPVMFSPPRSIPEFSTSSKSLESFSN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04953 657 Pfam Protein tyrosine and serine/threonine kinase 338 620 IPR001245 GO:0004672|GO:0006468
Mepo2g04953 657 MobiDBLite consensus disorder prediction 638 657 - -
Mepo2g04953 657 SMART serkin_6 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04953 657 SUPERFAMILY Protein kinase-like (PK-like) 323 649 IPR011009 -
Mepo2g04953 657 FunFam PR5-like receptor kinase 411 632 - -
Mepo2g04953 657 PANTHER RUST RESISTANCE KINASE LR10-RELATED 300 642 IPR045874 GO:0004672
Mepo2g04953 657 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Mepo2g04953 657 Pfam Wall-associated receptor kinase C-terminal 152 246 IPR032872 -
Mepo2g04953 657 ProSiteProfiles Protein kinase domain profile. 336 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04953 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Mepo2g04953 657 Pfam Wall-associated receptor kinase galacturonan-binding 32 98 IPR025287 GO:0030247
Mepo2g04953 657 Gene3D Phosphorylase Kinase; domain 1 310 410 - -
Mepo2g04953 657 MobiDBLite consensus disorder prediction 641 657 - -
Mepo2g04953 657 Gene3D Transferase(Phosphotransferase) domain 1 411 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04953 Mepo-Chr2 57674982 57679086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04953 9 650 Receptor kinase-like Gene Family AT5G38260 38.710 7.57e-152 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo2g04953 PK_Tyr_Ser-Thr 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04953 - - gmx:100816285 901.353