Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04945 ATGTCGACGCCATTGGACGGAGGAGGAGGAGTGGCGTTGCTCTCCAACTCCGCCACGGCGAACAAAGTCGATTCCTCTTCGACTCTCAATGGCGGTTTGAAGTGTTCCAAACTCGATTCACCTATCTTGATTTTCTTGTTCTTTCATAAAGCTATTCGGAATGAGCTTGACGTTTTACATCGATTAGCCATGTCATTCGCCACTGGTAATCGTTCTGATATTCGTCCTCTCTTCGACCGTTATCATTTCCTCAACTCTATTTATCGTCATCACTCCAATGCTGAAGATGAGGTGATTTTTCCCGCTCTAGACAGACGTGTGAAGAATGTAGCACAAACTTATTCTCTTGAGCACAAGGGTGAAAGCAATCTTTTTGATCATCTATTTGAGCTGTTAAATTCTTCCACCAAGAATGATGAGAGTTTTCCAAGAGAATTGGCATCCTGCACAGGAGCTTTACAGACATCAGTTAGTCAACACCTGGCAAAGGAAGAGGAACAGGTTTTTCCTCTACTTATCGAGAAGTTCTCTCTTGAGGAACAAGCATCCTTAGTTTGGCAGTTTCTTTGTAGTATTCCGGTGAATATGATGGCAGAATTTCTTCCCTGGCTTTCAACATCTATATCAGCCGATGAATCTCAGGATTTACGAGATTTCTTAATCAAGATTGTGCCCGAGGAAAGGCTTCTTCAAAAGGTTGTTTTCACCTGGATGGAAGGGAGAAGTAGTGTTAGCACAAGTCAAAGTAGTGCTAACACAATTCAAAGTAGTGCAGATCATTCTCAAGTTCAATGTTGTTCTAGTCCACTAACCCATCTTGGAAGAGTAAATTGTGTATGTGAGTCCACGTCAACTGGAAAAAGGAAACATTCTGGATCTATGTTAGATGTTTCTGATGCCACCGGAACACATCCTATAGATGAGATATTACTCTGGCATAATGCAATAAAAAAAGAGCTAAGTGAGATAGCAGTGGAAACCAGGAGGATACAACACTCTGGAGATTTTACTGATATATCAGCTTTTAATGACAGATTGCAATTCATTGCCGACGTTTGCATATTTCATAGTATTGCCGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAGAACTTTCTTTCTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTTCGGTGTTTGATTGAAAGTATTCTAAGTGAAGGAGCATCATCTAATTCAGAAGTTGAATTTTATTCCAAGTTATGCTCACATGCTGATCATATTATGGAAACCATTCAGAGGCATTTCTATAATGAAGAAGTTCAGGTTCTTCCACTTGCAAGAAAGCACTTTAGCTTTAGAAGACAATGTGAGCTTCTCTATCAAAGCTTATGCATGATGCCTCTGAAATTGATTGAGAGAGTCCTACCATGGTTGATAGGATCTTTAACTGAAGAAGAAGCCAAAATGTTTCTGAGAAACATGCAATTTGCAGCTCCAGCAACAGATTCTGCTCTGGTCACACTCTTCAGTGGTTGGGCATGCAAGGCTCGTAATGAAGGCATGTGTTTGTCTTCAGGAACATCAGATTGCTGTCCTGCTCAAAGACTTTCTGATATTGAAGAAAATATTGATCGGCCATCCTGTGTTTGTTCCTCCACATCATCTCAAAGACATTGCTCGGTAATACTTGAGTCAGATGGCAACAAGAGACCAGTCAAGCGAAACACGTTTAAGTTGAACAATGGAGATGTACCTGAAATTTCAGAGACTGAAAGTATTCAGAAACAATGCTGCAGTCCTAGGTCTTGTTGTGTGCCAGGTTTAGGAGTTAACAGTAACAATTTGGGGCTTAGTTCAATTTCAACAGCCAAGTCCTTGCGCTCCTTGTCTTTCAGCTCTTCTGCTCCATCTCTCAATTCCAGTCTTTTCATATGGGAAACAGAGAGCAGCTCATGTGATGTTGGCTCTGCAGAAAGACCAATTGATACCATATTTAAATTCCATAAAGCTATACGTAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTGAGTGATAGTGACGGGACAATTATTCGGCAATTTAGTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCAGCATTAGAATCCAAAGAGGCCCTTCACAATGTGAGCCATTCGTACATGTTGGACCATAAGCAGGAAGAACAATTGTTTGAAGATATTTCATGCGTTCTTTCTGAGTTTTCTGTCCTTCATGAAGCTTTGCAGTTGACCCATATGGCAGACGATTTGAGTGATAGTAATTTTGGAACTTCTGATGTCAATGATAGTGATGATGTCAAGAAGTATAACGAACTTGCAACAAAGCTCCAGGGGATGTGTAAATCCATAAGAGTGACCCTGGATCAGCATATTTTCAGAGAAGAGCGTGAACTGTGGCCATTGTTTGGGAAACATTTCACTGTGGAAGAACAAGATAAGATAGTAGGCCGGATAATTGGAACTACAGGTGCTGAAGTTCTCCAGTCAATGTTACCGTGGGTAACTTCCGCACTTACCCAGGATGAACAGAATAAAATGATGGATACATGGAAGCAGGCAACTAAGAATACTATGTTCAATGAATGGCTTAATGAATGCTGGAAAGAGAGTCCAGAATCTATATCACAGACAGAAACATCACATTGTAGCACATCTCATAGAGGTTCTGAGTATCAGGAATGCTTGGACTACAATGATCAAATGTTTAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAATGAACTTGAGTCAGAGATCCGGAAGGTTTATCGTGACTCAACTCTTGATCCTAGGAGAAAGGCATATCTTGTGCAGAATCTTTTGACAAGTCGTTGGATAGCTGCCCAGCAGAAATCACCTAAAGCTCCATCTGAAGGATCATCTAACGGGGTCGAAATAGAAGGACACTCACCATCATTTCGGGACCCAGGAGAACTTGTATTTGGGTGTGAGCACTATAAGAGAAATTGCAAGCTTCGAGCTGCATGCTGTGGCAAGTTGTTTACTTGCAGATTTTGTCATGACAATGTGAGCGATCACTCAATGGACAGAAAAGGAACATTAGAAATGATGTGTATGCGCTGCCTGAATATACAGCCAATTGGGCCTATATGCATGACACCTTCATGTAATGCACTTTCAATGGCAAAGTACTATTGCAGTATATGCAAATTTTTCGACGATGAAAGGAATGTATACCATTGCCCATTTTGCAATTTATGCCGTGTTGGACAAGGGCTTGGGATTGATTATTTTCACTGCATGAAATGCAATTGCTGCCTGGGGATTAAATCATCATCTCATAAGTGCCTGGAGAAAGGTTTAGAGATGAATTGCCCAATTTGCTGCGACGACTTATTCACGTCAAGTGCTACAGTCAGAGCTCTGCCTTGTGGCCACTACATGCATTCTGCTTGCTTTCAGGCATACACTCGTAGTCACTACACGTGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCCTTATTGGCTGCGGAGGAGCTCCCTGAAGAGTATAGGGACCGTCATCAGGACATCCTTTGCAATGACTGTGATCGAAAGGGCACTTCACGCTTCCACTGGTTGTATCACAAATGTGGATCTTGTGGCTCTTACAATACCCGGCTGATCAAGTGTGAGACACATTCCAGCTGCTCTTAG 3732 0.4151 MSTPLDGGGGVALLSNSATANKVDSSSTLNGGLKCSKLDSPILIFLFFHKAIRNELDVLHRLAMSFATGNRSDIRPLFDRYHFLNSIYRHHSNAEDEVIFPALDRRVKNVAQTYSLEHKGESNLFDHLFELLNSSTKNDESFPRELASCTGALQTSVSQHLAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSTSISADESQDLRDFLIKIVPEERLLQKVVFTWMEGRSSVSTSQSSANTIQSSADHSQVQCCSSPLTHLGRVNCVCESTSTGKRKHSGSMLDVSDATGTHPIDEILLWHNAIKKELSEIAVETRRIQHSGDFTDISAFNDRLQFIADVCIFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIESILSEGASSNSEVEFYSKLCSHADHIMETIQRHFYNEEVQVLPLARKHFSFRRQCELLYQSLCMMPLKLIERVLPWLIGSLTEEEAKMFLRNMQFAAPATDSALVTLFSGWACKARNEGMCLSSGTSDCCPAQRLSDIEENIDRPSCVCSSTSSQRHCSVILESDGNKRPVKRNTFKLNNGDVPEISETESIQKQCCSPRSCCVPGLGVNSNNLGLSSISTAKSLRSLSFSSSAPSLNSSLFIWETESSSCDVGSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDSDGTIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSEFSVLHEALQLTHMADDLSDSNFGTSDVNDSDDVKKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPESISQTETSHCSTSHRGSEYQECLDYNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSRWIAAQQKSPKAPSEGSSNGVEIEGHSPSFRDPGELVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKGTLEMMCMRCLNIQPIGPICMTPSCNALSMAKYYCSICKFFDDERNVYHCPFCNLCRVGQGLGIDYFHCMKCNCCLGIKSSSHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTRSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRHQDILCNDCDRKGTSRFHWLYHKCGSCGSYNTRLIKCETHSSCS 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04945 1243 Gene3D nmb1532 protein domain like 38 190 - -
Mepo2g04945 1243 Gene3D nmb1532 protein domain like 307 454 - -
Mepo2g04945 1243 Gene3D - 1199 1240 - -
Mepo2g04945 1243 SUPERFAMILY RING/U-box 1125 1174 - -
Mepo2g04945 1243 ProSiteProfiles Zinc finger CHY-type profile. 992 1061 IPR008913 GO:0008270
Mepo2g04945 1243 Pfam CHY zinc finger 999 1074 IPR008913 GO:0008270
Mepo2g04945 1243 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 695 1239 - -
Mepo2g04945 1243 CDD Hr-like 654 814 - -
Mepo2g04945 1243 Pfam Ring finger domain 1127 1169 IPR001841 -
Mepo2g04945 1243 SUPERFAMILY CHY zinc finger-like 995 1055 IPR037274 GO:0008270
Mepo2g04945 1243 ProSiteProfiles Zinc finger CTCHY-type profile. 1064 1127 IPR017921 -
Mepo2g04945 1243 Gene3D nmb1532 protein domain like 648 891 - -
Mepo2g04945 1243 CDD Hr-like 307 436 - -
Mepo2g04945 1243 MobiDBLite consensus disorder prediction 964 983 - -
Mepo2g04945 1243 Pfam Zinc-ribbon 1175 1232 IPR039512 -
Mepo2g04945 1243 ProSiteProfiles Zinc finger RING-type profile. 1128 1170 IPR001841 -
Mepo2g04945 1243 CDD Hr-like 44 170 - -
Mepo2g04945 1243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1124 1172 IPR013083 -
Mepo2g04945 1243 FunFam Zinc finger protein-related isoform 1 1123 1172 - -
Mepo2g04945 1243 Pfam Hemerythrin HHE cation binding domain 652 815 IPR012312 -
Mepo2g04945 1243 Pfam Hemerythrin HHE cation binding domain 46 172 IPR012312 -
Mepo2g04945 1243 SMART ring_2 1128 1169 IPR001841 -
Mepo2g04945 1243 MobiDBLite consensus disorder prediction 964 986 - -
Mepo2g04945 1243 SUPERFAMILY Zinc hairpin stack 1065 1121 IPR037275 -
Mepo2g04945 1243 CDD RING-H2_Pirh2-like 1127 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04945 Mepo-Chr2 57593950 57605706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04945 1 1238 C2H2 Transcription Factor Family AT3G18290 67.009 0.0 1688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04945 K16276 - gmx:100801725 2209.49