Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04935 ATGGCGACAAAAAAGAGAAAATCTAGCAAAGAAAAAGAAAAGGTTGACGCAACAAGCGAAGATGAATTTTATCATCAAACATTTCGAATTGTGGCTAACGACCCGGATGCAACAGAGAGTTCAAGTGATGAACAAGTTCAAAAAACTAATGCCTCAAAGCCATTACCGCCTATGAGAATTTTGCGCGAGTTTGTTCAACCAAATCCAAAAATAGTTAACAAGCTTCCTCAAAAACAAGGATTGTGGAGATGGTTGTCCACAAGTATTTACAAAGGTGTTCGGCGCCTCCGTGGGAAAAAGGAAAGATATGCAGCTCAGATTAGAAATCCATTTGAAAAGAGAACTCAGCACCTTGGTACTCATGATACCGAATATCAAGCTGCTTTGGCTTATCGCAGAAAGACTAAGGAGTTCCATAATTTGAATAATGTTGATTGTTTTGCAGTTTGA 450 0.3867 MATKKRKSSKEKEKVDATSEDEFYHQTFRIVANDPDATESSSDEQVQKTNASKPLPPMRILREFVQPNPKIVNKLPQKQGLWRWLSTSIYKGVRRLRGKKERYAAQIRNPFEKRTQHLGTHDTEYQAALAYRRKTKEFHNLNNVDCFAV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04935 149 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 26 137 - -
Mepo2g04935 149 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g04935 149 Pfam AP2 domain 89 133 IPR001471 GO:0003700|GO:0006355
Mepo2g04935 149 MobiDBLite consensus disorder prediction 33 52 - -
Mepo2g04935 149 PIRSF PTI6 1 149 IPR017392 GO:0003700
Mepo2g04935 149 ProSiteProfiles AP2/ERF domain profile. 89 148 IPR001471 GO:0003700|GO:0006355
Mepo2g04935 149 MobiDBLite consensus disorder prediction 33 57 - -
Mepo2g04935 149 Gene3D AP2/ERF domain 89 148 IPR036955 GO:0003700|GO:0006355
Mepo2g04935 149 SUPERFAMILY DNA-binding domain 88 144 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04935 Mepo-Chr2 57482180 57482629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04935 53 138 AP2-EREBP Transcription Factor Family AT1G49120 39.560 6.72e-09 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g04935 AP2 4e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04935 - - mtr:112417063 238.81