Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04924 ATGACTTGCAACCCAAGAAACATGCATTCTGCTATCCGTTTCTTTAAGATTGTTACCTCAACAAATATTCAAGATGGAACCCTAAAAATTCCAAATGCTTTCACTAAGAAATATAGTGGTGATTTGTCAAACCCAATGTTTCTCAAGACTCCCGATGACAAAAAATGGGAAGTACATTTGACTAAAAGGGATGATGATATTTGGATTCACAAGGGTTGGAAAGAATTTGTTACACATTATTCTATAGATCATGGACACATGCTGATGTTTCAATATGAAAAAACATCTCATTTTGAGGTTTACATATTTAGCAAGAGTACTTTGGAAATTGAATATAACGTTGATGGCAATAATCAACATGAGCAGAACAACCTTGTTGAAAATTTGGATGAAAAACCTACATGCAAGAAGACTAGACCAAAATCACAAATTTCAAGTCCTCAACCACATAAGAAATTGAGAATTGGCGCAAGCGAAGACGTTGGAACAAGCTCCGCATTGAAAAAAAATCCTAAACTTGTCCAAGTTAAAGAGGAGAGTGAAGATACCACTGAATGCCTTAATGTGAAGCATGATCAAGAGCCAAAGAATTCATCTTCAAAAATTGCTGCAGCTTTAAACAAAGCAAAAAACTACAAAACTAACAATCCCTTTTTCACTGTTGTCATGACATATTCCTATGCTAATAACTACATGTATATCCCAGTAGATTTTGAACAAAAGTATTTGAAGGAAAAACAAAGCGTTATTGCCCTTCGAGTCTTGGATAATGAGAGAATTTGGAATGTTAAACATTGTGGGAGACATGTTAGTACTGGATGGAAAAATTTTGCATTTGATAATAATTTGAAAGTGGGAGATGTTTGTCTTTTTGAGATGATCAAAAGCAATGTTTATGCTTTTAAAGTACTAATTTTTCGACTAGGCGAAGAACATTCCCTTCCACCACAAGTTGATGAAGATGGAGTCAATTGGGTTGAAACAGCAAGAATCCCTGGAGTTGAAAGTAAAACTATCATGTCATACAAAGGAAAGAAGGCAACTCAAAATTCACTGAATGCTAGTTCATGCTCTTTCAAAAGTTCTGAAGTTCAGAAAGAATCCAATCAATTCGCATCCACTCTGAAAAATTCACATTTCACTATCAAAGTGAAATCAAGTCATGCGGATGTTTACAAACCGCGTATACACAACTCGTTCTCCAAGAAGTACTTGTGTCACAAGAAGATTGTAACGTTACAATTTAATAAAAACCTGTGGCATGTAAGATTGGCGAGCTGTCCATCCGAACCGTCAACCAAGTTGAGTACAGGTTGGAGTAAGTTTGTAGAGGAAAATAAATTAGAGGCTGGAGATGTATGTGTTTTTGAGCTCGTCAATAAGGAAGATCTTGTGTTTGATGCTCATATTTTCAGAGGCTGCAATTAG 1428 0.3557 MTCNPRNMHSAIRFFKIVTSTNIQDGTLKIPNAFTKKYSGDLSNPMFLKTPDDKKWEVHLTKRDDDIWIHKGWKEFVTHYSIDHGHMLMFQYEKTSHFEVYIFSKSTLEIEYNVDGNNQHEQNNLVENLDEKPTCKKTRPKSQISSPQPHKKLRIGASEDVGTSSALKKNPKLVQVKEESEDTTECLNVKHDQEPKNSSSKIAAALNKAKNYKTNNPFFTVVMTYSYANNYMYIPVDFEQKYLKEKQSVIALRVLDNERIWNVKHCGRHVSTGWKNFAFDNNLKVGDVCLFEMIKSNVYAFKVLIFRLGEEHSLPPQVDEDGVNWVETARIPGVESKTIMSYKGKKATQNSLNASSCSFKSSEVQKESNQFASTLKNSHFTIKVKSSHADVYKPRIHNSFSKKYLCHKKIVTLQFNKNLWHVRLASCPSEPSTKLSTGWSKFVEENKLEAGDVCVFELVNKEDLVFDAHIFRGCN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04924 475 SUPERFAMILY DNA-binding pseudobarrel domain 213 308 IPR015300 -
Mepo2g04924 475 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Mepo2g04924 475 SUPERFAMILY DNA-binding pseudobarrel domain 12 106 IPR015300 -
Mepo2g04924 475 Gene3D - 7 107 IPR015300 -
Mepo2g04924 475 SMART B3_2 218 309 IPR003340 GO:0003677
Mepo2g04924 475 SMART B3_2 371 472 IPR003340 GO:0003677
Mepo2g04924 475 SMART B3_2 14 106 IPR003340 GO:0003677
Mepo2g04924 475 CDD B3_DNA 217 307 IPR003340 GO:0003677
Mepo2g04924 475 CDD B3_DNA 13 104 IPR003340 GO:0003677
Mepo2g04924 475 ProSiteProfiles B3 DNA-binding domain profile. 217 309 IPR003340 GO:0003677
Mepo2g04924 475 ProSiteProfiles B3 DNA-binding domain profile. 420 474 IPR003340 GO:0003677
Mepo2g04924 475 Pfam B3 DNA binding domain 395 472 IPR003340 GO:0003677
Mepo2g04924 475 Pfam B3 DNA binding domain 219 307 IPR003340 GO:0003677
Mepo2g04924 475 Pfam B3 DNA binding domain 14 105 IPR003340 GO:0003677
Mepo2g04924 475 CDD B3_DNA 379 472 IPR003340 GO:0003677
Mepo2g04924 475 MobiDBLite consensus disorder prediction 130 173 - -
Mepo2g04924 475 SUPERFAMILY DNA-binding pseudobarrel domain 376 474 IPR015300 -
Mepo2g04924 475 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 361 473 IPR044837 -
Mepo2g04924 475 Gene3D - 358 474 IPR015300 -
Mepo2g04924 475 Gene3D - 198 310 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04924 Mepo-Chr2 57357589 57360006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04924 396 472 B3 DNA Binding Superfamily AT3G18990 35.897 2.12e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo2g04924 B3 1.5e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04924 - - tpra:123902302 681.404