Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04914 ATGACAAGTCGACTAAAGGAAGATCAGAAACATGAACGAACTATTCGAGGTCTTCTCAAACTTACACCGAATAGAAGATGCATTAACTGCAACAGCATGGGACCACAATATGTATGCACAAATTTCTGGACGTTTGTTTGCACAAACTGCAGTGGAATACACCGGGAATTTACTCATCGAGTAAAATCAATCTCCATGGCTAAATTTACTGCACAAGAAGTAAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATATTTTTTAAAGAGTGGGATGCACAAACTCATTCTTTACCTGATAGCGGTAATGTTGACAGGCTTCGGGATTTTATCAAGCGTGTTTACGTGGATAGGAGATTCACTGGCGACAGGTCCTATGACAAACCTCCAAGAGTAAAGGGCGACAAGGATGATTCCTATGAAGCCAGGAGGACGGAGTCGTATCAGGGAGGACCAAAAAGCCCTCCGTATGAGGATACATATGAACACCGTTACAGTGACAGGTCTAGTTCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGACATTATGCCGATCATAAGAGAAGCCCTGGCCGCCCTCCAATAATCAATGACTGGCGCCGAGAAGATAGATTTGGAGATGGGCGGAAATTTGAAGATAATCATATATCCGATGGAGGTAATAAGATGGAAAATCAATCTCCTGATCGAGCCAAAGACCTGGGTTCTTCAAGCCTACTACCTGTTGTCCGACCTGTTAGAGAAATTTTGGGAGAAAATGTAGTACCTCTGCGAATTAGTGAACCTCCCAAAGCAAACAGTGGACAGGCTGCTAATGGCTCAACACTCACACAGAGAACGGCATCTTCCAGTAGCTTGGCATCCAGCAATGGAACACCGTCAGAAGTTAAGCTTGAGACTATCAGGAGCCTTATTGATTTTGATGATGTTCCTGAACCACCTATTGCTCCAGCAATTCCTCATGCCACACAAACTACCGTGGCTCAAATTGTGAACCCAACAAATTCTGATGATAACAATTGGGCCTCCTTTGATGTTGCACCTGAGGTAAAAGTATCTCAGGGCCTTTCAAATGTAAATCCACTCGAATCGATGCTGTCCCAGTTGTCAGTTCCATCATCTTTACCTGATCAAGTTTCTGGAGCCCAAGGGCCTTTGGCGGGATCAGCTCTTACTGCTACTGTCGGAGCTCCAACTGTGAGCAGCCTCACAACATTCCCATCCAGTGTTGCTTCATTAGCATCTTCTGGATTGACAATGGAATCACCTTTCAATAATGCACTCCCATGGCCTAATTTGCAGTATCAGCAACAACAACCGTTGTTCACATCTGCTGTTGGTCAGCCTACTATTCAACAATCTACACCACCAGTAGGTGGAGCTTTGAATAACCAGGGGCATCCAAGCACGCTAGTGCCACATTTCTCAAAGGTTGTCGATGGGGAAAAATCTAATTTTGCGTCACAAACTTCTACTGTAGACATAAAACCAAGTGGAAGAAATGAACTTCCTGAGGATCTATTCACTATAAAATATTCATCCTTCCCTGCTCCAGTCCCAGGCTGGCAAATGGGTGCGCCACCTGGCATGGGTGTCTCAGTTCAATATAATAATGCGATGTCCATGCCGAGTTTCCCACAACCATCACAATCTACAAATCCATTTGACGTGATCAACGAACCAACACCAGTTCAAGCCCCAACCTTTCCTTCTATGTCACCTTTGCAAGGTGCTCTGCCTAGTGTAGCGCCTTCAGCTGCAGTAAACCCTTCAAACATGGGTAATCAATCTCTTTCCTGGAATCCACCCTCCTCGTTATCATATGCACCAACGCTCCCTCCACAAGCACATATTCATGCCTCAGCAATGGGACCAAGGGCGTACATGGAGCAACAACTTCCCACTAATGTGTCGATCCCAAGGCATCAAGGAATTGGGACTTTTGGTAATGAGGGAGCTGCTTTTGGCTTCTCTAATATAGATCAGCAACTGAATGGTAGGTCGTCGGCCTCTGCTACTTTAAACCCCTTCCCTGCAGGAGGTAATCCATTCGGATGA 2067 0.4519 MTSRLKEDQKHERTIRGLLKLTPNRRCINCNSMGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTAQEVSALQEGGNQRAKEIFFKEWDAQTHSLPDSGNVDRLRDFIKRVYVDRRFTGDRSYDKPPRVKGDKDDSYEARRTESYQGGPKSPPYEDTYEHRYSDRSSSGGRSPGYDQERHYADHKRSPGRPPIINDWRREDRFGDGRKFEDNHISDGGNKMENQSPDRAKDLGSSSLLPVVRPVREILGENVVPLRISEPPKANSGQAANGSTLTQRTASSSSLASSNGTPSEVKLETIRSLIDFDDVPEPPIAPAIPHATQTTVAQIVNPTNSDDNNWASFDVAPEVKVSQGLSNVNPLESMLSQLSVPSSLPDQVSGAQGPLAGSALTATVGAPTVSSLTTFPSSVASLASSGLTMESPFNNALPWPNLQYQQQQPLFTSAVGQPTIQQSTPPVGGALNNQGHPSTLVPHFSKVVDGEKSNFASQTSTVDIKPSGRNELPEDLFTIKYSSFPAPVPGWQMGAPPGMGVSVQYNNAMSMPSFPQPSQSTNPFDVINEPTPVQAPTFPSMSPLQGALPSVAPSAAVNPSNMGNQSLSWNPPSSLSYAPTLPPQAHIHASAMGPRAYMEQQLPTNVSIPRHQGIGTFGNEGAAFGFSNIDQQLNGRSSASATLNPFPAGGNPFG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04914 688 MobiDBLite consensus disorder prediction 124 240 - -
Mepo2g04914 688 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Mepo2g04914 688 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Mepo2g04914 688 MobiDBLite consensus disorder prediction 262 298 - -
Mepo2g04914 688 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Mepo2g04914 688 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Mepo2g04914 688 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Mepo2g04914 688 MobiDBLite consensus disorder prediction 268 298 - -
Mepo2g04914 688 PANTHER ARFGAP/RECO-RELATED 1 688 IPR044820 GO:0005096
Mepo2g04914 688 MobiDBLite consensus disorder prediction 181 232 - -
Mepo2g04914 688 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Mepo2g04914 688 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Mepo2g04914 688 CDD ArfGap_AGFG 12 122 - -
Mepo2g04914 688 MobiDBLite consensus disorder prediction 124 146 - -
Mepo2g04914 688 Pfam Putative GTPase activating protein for Arf 14 123 IPR001164 GO:0005096
Mepo2g04914 688 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04914 Mepo-Chr2 57290422 57298373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04914 12 122 C2H2 Transcription Factor Family AT4G21160 30.172 1.41e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04914 - - gmx:100815114 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04914 2 57290422 57298373 Mepo2g04914 2 57290422 57298373 ECH