LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g04897	ATGCCATCATCATTCTCTATCTTCCCATCACCACCTTCACTTCAAACCCCTAACTCCAACCATACTCATCTCTTCAATCCAATCAAATTCCCCAAATTCCATTTCAATTCAAGAACACTCTCTTCACCACCACGCTCTCACCCCAACTTTCCCCATCTCTACAAAACCTCTTCCACTCTTCGCCGTAGAATTCCATGTAGTAAAGCTTTGAAAGACTCCGGCGGAGGTGGCGGCGACGGTGGTGGAGATAGTGGTGGTGACCGGGAGGTGGATAAGAAAAATGGGTCGTCCGGACCTTTTCCTGATTGGTTGAATTTCACTTCTGATGATGCCAAAACGGTGTTTGCTGCTCTTGCTGTATCGCTTGCTTTTCGTATTTTCATTGCTGAGCCTCGTTTCATTCCATCCTTGTCAATGTATCCTACTTATGATGTTGGAGATCGAATTGTTGCCGAAAAGGTTTCATATTATTTTAGAAAGCCGTGTGCAAATGATATCGTGATATTTAAAAGCCCTCCAGTCCTTCAAGAAGTTGGGTACACTGATGATGATGTTTTCATAAAACGTGTTGTTGCAAAGGAAGGTGATGTCGTAGAGGTCCGTAATGGGCATCTAATAGTTAATGGGGTTGAGAGGGATGAGAAGTTTATCAATGAACAACCAAAGTATGAGATGAAACCCACACGTGTTCCTGAGAAATCCGTTTTTGTGATGGGAGACAACCGCAATAACAGCTACGACTCCCATGTCTGGGGTCCCCTGCCAGCCAAGAATATCATAGGTAGATCAGTATTCCGCTATTGGCCACCAAATAGAATTGCTGCCACAGTTGCTAAGGGAGGGTGCCCTGTTGATACCAAGCAGGAGACTCCTAGTACTACTCTAGCATCTCAATGA	897	0.447	MPSSFSIFPSPPSLQTPNSNHTHLFNPIKFPKFHFNSRTLSSPPRSHPNFPHLYKTSSTLRRRIPCSKALKDSGGGGGDGGGDSGGDREVDKKNGSSGPFPDWLNFTSDDAKTVFAALAVSLAFRIFIAEPRFIPSLSMYPTYDVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVRNGHLIVNGVERDEKFINEQPKYEMKPTRVPEKSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIAATVAKGGCPVDTKQETPSTTLASQ	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g04897	298	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	230	249	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mepo2g04897	298	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	127	143	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mepo2g04897	298	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	186	198	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mepo2g04897	298	PANTHER	SIGNAL PEPTIDASE I	100	274	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mepo2g04897	298	MobiDBLite	consensus disorder prediction	1	22	-	-
	Mepo2g04897	298	CDD	S26_SPase_I	130	262	IPR019533	GO:0004252\|GO:0006465
	Mepo2g04897	298	Gene3D	Umud Fragment, subunit A	124	280	-	-
	Mepo2g04897	298	SUPERFAMILY	LexA/Signal peptidase	125	274	IPR036286	-
	Mepo2g04897	298	MobiDBLite	consensus disorder prediction	67	96	-	-
	Mepo2g04897	298	FunFam	Peptidase/ serine-type peptidase	136	267	-	-
	Mepo2g04897	298	NCBIfam	signal peptidase I	112	270	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mepo2g04897	298	ProSitePatterns	Signal peptidases I signature 3.	235	248	IPR019758	GO:0004252\|GO:0016020
	Mepo2g04897	298	Pfam	Signal peptidase, peptidase S26	111	268	IPR019533	GO:0004252\|GO:0006465

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g04897	Mepo-Chr2	57155688	57159048	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g04897	139	269	MADS-box Gene Family	AT1G29960	31.818	9.91e-12	59.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g04897	K03100		-	zju:107431814	384.03

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo2g04897	2	57155688	57159048	Mepo2g04897	2	57155688	57159048	ECH