Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04888 ATGGAGCCGGGTCGTGCAACCAAGAGTTGGAGCATCCATACCCGATCGGAGATAATCGGCAAATACAAAGTCATGGAACGAATCGGCTCCGGAGCTTACGCCGACGTCTACCGTGGACGTCGTCTCTCCGACGACCTAACAGTCGCTCTCAAAGAAATCCACGACTACCAGTCCGCATTCCGAGAAATCGAAGCGTTGCAGATGCTTCAAGGCTCTCCAAACGTCGTCGTTTTGCACGAATACTTCTGGCGCGACGATGAAGACGCTGTTCTCGTTCTTGAGTACCTTACCACTGATTTGGCTACCGTGATTTCCAATGCTGCTAAGGAAGGGATTCCTATTCCAGTTGGTGAGTTGAAGCGTTGGATGATTCAGATTCTTTGTGGACTTGATGCTTGTCATAGGAATATGATTGTTCATCGTGATTTGAAACCTTCTAATCTCTTGATTTCTGATTGTGGTGTTCTCAAATTGGCTGATTTTGGACAGGCAAGGATACTCATAGAGCCTGGATTTGATGCTTTTGAGGAGAATCCACCACCATGTGAGCAGGATTGTTCTAATCATGAAATTTCACTTCATCATCCTGAAGCTTTTCCTCACACCGACAACTTAAGCCAATTAGGATTTGAAAATCAAGAGCAGGGAAGCAGTCATGAAGAGTATTTTAGTGTTTTAGATGAGCTGAAAGCAAATAAATCTGTGGATGACGTTGACAAGGATACAAACATTCCGGATGGAAATACTTCTTGTCTTGCAACGTGCACAACAAGTGATATCGATAACGATCCTATGAGAACTTCTTTTAGTTATGAAGCAATGGAGGGGGAAGATAAAGAACATGGTTGTCTCACATCATGTGTTGGAACTCGCTGGTTCCGGGCTCCTGAATTGCTTTATGGATCTGCAAATTATGGTTTAGAAATTGATCTCTGGTCACTTGGATGTATTTTTGCTGAGCTCTTGACTCTGAAGCCCTTGTTTCCTGGAACTGCGGATATTGACCAGCTCAGTAGAATTATTAATGTTTTGGGCAATCTTGATGAGAGAGCTTGGCCTGGTTGTTCAAAACTTCCTGATTACGGAATAATCTCGTTTAGCAAGGTAGAAAACCCTGCTGGTGTTGAAGCCTGCCTCCCCAACCGCTCCCCCGACGAAGTGGCTCTAGTAAAAAAACTGGTTTGTTATGATCCGGCTAGGAGGGCTACAACAATGGAGCTACTCCATGACAAGTACTTTAACGAAGAACCTCTTCCTGTTCCTGTTTCAGAGTTGCGATTTCCTTTGACCAGAAATACAGATGATGATTCTGTTGGTGTGTGGCAGGATTACGATGAAATTGGTTCTGATTCTGATTTTGATGACTTTGGCCCTGTGAATATCACCAAAACTGGTACAGGTTTCTCCATACAGTTTCCTTGA 1422 0.4402 MEPGRATKSWSIHTRSEIIGKYKVMERIGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSPNVVVLHEYFWRDDEDAVLVLEYLTTDLATVISNAAKEGIPIPVGELKRWMIQILCGLDACHRNMIVHRDLKPSNLLISDCGVLKLADFGQARILIEPGFDAFEENPPPCEQDCSNHEISLHHPEAFPHTDNLSQLGFENQEQGSSHEEYFSVLDELKANKSVDDVDKDTNIPDGNTSCLATCTTSDIDNDPMRTSFSYEAMEGEDKEHGCLTSCVGTRWFRAPELLYGSANYGLEIDLWSLGCIFAELLTLKPLFPGTADIDQLSRIINVLGNLDERAWPGCSKLPDYGIISFSKVENPAGVEACLPNRSPDEVALVKKLVCYDPARRATTMELLHDKYFNEEPLPVPVSELRFPLTRNTDDDSVGVWQDYDEIGSDSDFDDFGPVNITKTGTGFSIQFP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04888 473 ProSiteProfiles Protein kinase domain profile. 22 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04888 473 FunFam Cyclin-dependent kinase F-1 13 107 - -
Mepo2g04888 473 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Mepo2g04888 473 Gene3D Transferase(Phosphotransferase) domain 1 277 417 - -
Mepo2g04888 473 Pfam Protein kinase domain 281 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04888 473 Pfam Protein kinase domain 22 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04888 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mepo2g04888 473 PANTHER CELL DIVISION PROTEIN KINASE 21 419 - -
Mepo2g04888 473 SMART serkin_6 22 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04888 473 SUPERFAMILY Protein kinase-like (PK-like) 9 427 IPR011009 -
Mepo2g04888 473 Gene3D Transferase(Phosphotransferase) domain 1 11 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04888 Mepo-Chr2 57085874 57088622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04888 9 473 Core Cell Cycle Gene Families AT4G28980 63.214 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Mepo2g04888 Pkinase 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04888 - - ahf:112726382 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04888 2 57085874 57088622 Mepo2g04888 2 57085874 57088622 ECH
Mepo2g04888 2 57085874 57088622 Mepo7g00420 7 7323945 7327497 PCT