Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04884 ATGAATAGAGGTGTTTATCTGCAAAGCTCACCAGTGCAACAAATGATGGCTGGAAACCCTAACAACTGGTGGAACACCATGCGCCCTCCTGCACCTGATCATCATCATCATCAACCTAATTTCTTCTCAACTACTACTCCTAATTCTAATTTTGAAACTCCATATCCTCATGCATCTTCTCTTCCTCTTCCTTCTTGGCATGAAAATCAAGATCAACTTCCTGAGTCATGGAGTCACCTCCTTATGAATGGTGTGGTGTATGAAGAAGAAGAGAAGGCTAGTAGTATGCTAAGTCAGCCTCCTTCAAATGCTTCTCTTGTTGATCATGTCAAACAAGAAAGTTCAGTGAACAACTATGTCTATGGAAATGAAGAATTTCATGGAACAGTACCAAATTCTACTTGGTCTCAAATAGTGTCGGTGCCTTCTTCTTCCTCCAAATCCTGTGCAACAAGTTTTACCGGTAGTAGCATGTTGGATTTCTCTAACACTAAAACGGATATAAGATCTCCACCATCAGATCTATCTTCTGATCAGTGTAATAGCTCTTCAGCTGGTGGGGCATTGAAGAAAGCTAGGGTTCAATCATCTACAACTCAGTCTACATTCAAGGTTAGGAAGGAGAAGTTAGGTGATAGAATTACTGCCCTTCATCAACTCGTTTCCCCATTTGGAAAGACTGACACAGCCTCTGTCTTATTAGAATCTATTGGTTATATCAGATTCCTTCAGAGTCAAATTGAGGCACTTAGTTTAGCATACTTGGGAAATGGATCAGGAAACATGAAGAAGCAACAACAACAATATGTTCAAGGAGAGAAGAATTGTTTATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGTTTGAAGAGAAAGGCAGTTAGTGAACAGGTCTGTGAAGAAAAAGAAAAGAAAGACTTGAGGAGCAGAGGATTGTGTTTGGTTCCAGTGTCATGCACAATGCAAGTTGGAAGTGACAATGGAGCTGATTATTGGGCTCCTGCTTTTGGTGGGGGATTTCAGTAG 1032 0.4099 MNRGVYLQSSPVQQMMAGNPNNWWNTMRPPAPDHHHHQPNFFSTTTPNSNFETPYPHASSLPLPSWHENQDQLPESWSHLLMNGVVYEEEEKASSMLSQPPSNASLVDHVKQESSVNNYVYGNEEFHGTVPNSTWSQIVSVPSSSSKSCATSFTGSSMLDFSNTKTDIRSPPSDLSSDQCNSSSAGGALKKARVQSSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQSQIEALSLAYLGNGSGNMKKQQQQYVQGEKNCLFPEDPGQLLNENCLKRKAVSEQVCEEKEKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPAFGGGFQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04884 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 194 243 IPR011598 GO:0046983
Mepo2g04884 343 Gene3D - 197 270 IPR036638 GO:0046983
Mepo2g04884 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 254 IPR036638 GO:0046983
Mepo2g04884 343 MobiDBLite consensus disorder prediction 161 191 - -
Mepo2g04884 343 MobiDBLite consensus disorder prediction 23 47 - -
Mepo2g04884 343 CDD bHLH_AtbHLH_like 202 251 IPR045239 -
Mepo2g04884 343 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 81 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04884 Mepo-Chr2 57026964 57030639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04884 1 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 42.033 1.11e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04884 - - psat:127105731 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04884 2 57026964 57030639 Mepo2g04884 2 57026964 57030639 ECH
Mepo2g04884 2 57026964 57030639 Mepo7g00409 7 7192444 7198355 PCT