Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04881 ATGTCTGTGCCAGTGGAACAAGGTTATGGAGAGGTTCCTTCAATGGAAACCAAAGAGAGAAGCATTGGTTTGAACCTCAAAGCTACTGAACTGAGACTAGGGTTACCAGGCTCTGATTCACCAGAGAGAGAAAATGGTGGTGTGCTTAAGAGTTTGGTGTCTGGTGCCAAAAGGGGTTTCTCTGATGCTATTACTGATGGAGTTTCTGGGAAGTGGGTTTTGTCTGGAAATGGTGGATCTGAAGCGGGCTTGTGTAAAGATGGAAACTTGTTCTCTCCTAAAGCTAAAGTTGGTGGTGAATGTAATAACCAACAAAACCCTTTCTCTGCTTCAGTTGTTGTTAAAGAAACTGTTACACACTCTCCAAAGCCTTTGCATGATAACAAACCACATGTTTCTCCTCCTTCTGCAAAGGCGCAAGTTGTGGGATGGCCTCCAATCCGATCTTTCCGGAAGAACTCAATGGTTTCACAGCCTCAAAAGAATGATGCTGATGCAGAAGCCAAGTCTGAATGCCTATATGTAAAAGTCAGCATGGAAGGTGCTCCATACTTGAGGAAAGTGGATCTGAATGGTTTTAGCTCTTATAGGGAACTTTCTTCAGCACTCGAAAAGATGTTCAGTTGTTTTACAATCAGTCAATGTGGCTCATATGGAGTTTCTTGTCGAGAAAAAAATCTAAGTGAAAGTAGATTGGTGGATCTCCTTCATGGTTCAGAATATGTGCTTACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCATGGGAGATGTTCACTGAGTCTTGCAAGAGGTTGAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCACCTCGAGCCATGGAGAAGTGTAAAAGTCGCAACTAG 882 0.4308 MSVPVEQGYGEVPSMETKERSIGLNLKATELRLGLPGSDSPERENGGVLKSLVSGAKRGFSDAITDGVSGKWVLSGNGGSEAGLCKDGNLFSPKAKVGGECNNQQNPFSASVVVKETVTHSPKPLHDNKPHVSPPSAKAQVVGWPPIRSFRKNSMVSQPQKNDADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSCREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAMEKCKSRN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04881 293 FunFam Auxin-responsive protein 167 285 - -
Mepo2g04881 293 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 280 IPR003311 GO:0005634|GO:0006355
Mepo2g04881 293 ProSiteProfiles PB1 domain profile. 172 275 IPR000270 GO:0005515
Mepo2g04881 293 Gene3D - 166 287 - -
Mepo2g04881 293 Pfam AUX/IAA family 29 284 IPR033389 -
Mepo2g04881 293 SUPERFAMILY CAD & PB1 domains 170 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04881 Mepo-Chr2 56983804 56987162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04881 49 283 B3 DNA Binding Superfamily AT4G23980 25.806 1.71e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo2g04881 AUX_IAA 1.9e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04881 K14484 - gmx:100803754 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04881 2 56983804 56987162 Mepo7g00407 7 7126421 7129521 PCT