Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04875 ATGGAGCGCATCGTTGGCGGCAGCTACAAGCTTGGCCGCAAGATCGGAAGTGGATCCTTCGGTGAAATTTACCTCGCTACGCATATTCATACCTTCGAAATCGTCGCCGTCAAAATCGAGAATAGTAAAACAAAGCATCCACAGTTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCAGGCTTAAAATGGTTTGGTATAGATAGGGAGGATAACGTGCTTGCCATTGATTTACTTGGGCCTAGTCTTGAAGATCTTTTTGTTTATTGTGGAAGGAAGTTTTCGTTGAAGACTGTGTTAATGTTAGCTGATCAAATGATTACTAGAATTGAATATGTGCATTCTAAAGGATATTTGCATAGGGATATTAAACCCGATAACTTCCTCATGGGACTTGGTCGGAAGGCCAATCAGGTTTACATAATTGATTTTGGGCTAGCAAAACGGTATCGGGAATCCACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAGCTTAACAGGGACTGCTCGATATGCAAGTTGCAATACTCATCTTGGCATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTCTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAGGGCTGCGACAAAGAAACAGAAGTATGAAAAAATATGTCAGAAGAAGGTATCAACTCCTATCGAGGTACTATGCAAATCTCATCCGGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCGTTGACATTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCTTATTTAGAGACCTATTTGCTCGTGAAGGCTATGAATTTGATTTCGTTTTTGATTGGACCATTTTAAAGTATCAGCAATCACAGAAGAATTTAGTTCAGCCTTCCTTATCTCCTGTTCCTGGTGCAAGTAACCATCATGCAGTCGCAATGGATGTTGACAATCATCAAGGGCATGGGGAAGAGCGAATTAGATCAGGAAATGCTACTGGTTCTGGTGTTAAAGTTCAGTTTAAATCATCAGCCGGTAGAAACTTGAGTTCTGACAATCCTCGTGACAAGAATATTTTTGGAGAAGCAAATATGGCGTCTGCTTCTTATGCTCCTGCTGGTACTTCAAAAAGGAACCCCTTAAACCCTGCCTTGTCTGCTGAACCTTCCAACACTGGACATGGGCAAGCCAGTAAAATTGGACCTTCAAATAGCTGGATGTCATCTCTGCAGCGCATATCCTCTTCCAAATGA 1275 0.4243 MERIVGGSYKLGRKIGSGSFGEIYLATHIHTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPGLKWFGIDREDNVLAIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRESTTNRHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYEKICQKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYEFDFVFDWTILKYQQSQKNLVQPSLSPVPGASNHHAVAMDVDNHQGHGEERIRSGNATGSGVKVQFKSSAGRNLSSDNPRDKNIFGEANMASASYAPAGTSKRNPLNPALSAEPSNTGHGQASKIGPSNSWMSSLQRISSSK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04875 424 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Mepo2g04875 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo2g04875 424 PANTHER CASEIN KINASE-RELATED 9 349 - -
Mepo2g04875 424 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mepo2g04875 424 MobiDBLite consensus disorder prediction 377 424 - -
Mepo2g04875 424 FunFam Casein kinase I isoform delta-like 1 340 - -
Mepo2g04875 424 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mepo2g04875 424 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04875 424 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04875 424 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04875 Mepo-Chr2 56943083 56949595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04875 8 215 EF-hand Containing Proteins AT4G23650 30.374 3.39e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo2g04875 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04875 K08960 - gmx:100800342 751.51