Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04872 ATGATCTTCTACTCATTTATGAGCTCATGTCGGGAAACAAGATACAACATTGCTGGAGGCTTGGCCTCAGTATTACTTTACCTACATGAAGAAAGGCAGCAGTATGTAATTCACAGGGATATCAAATCACGTAATGTTATGTTGGATTCAAATTTCAATACTAAGCTTGGTGACTTTGGACTAGCAAGAATGATGGATCATGGAAAAGGATCACAAACAACAATTTTAGCAGGAACAACAGGATATCTGGATACTGAATCCGCTACAAGAGGCAAGGCTAGCAGAGTCTGA 291 0.3952 MIFYSFMSSCRETRYNIAGGLASVLLYLHEERQQYVIHRDIKSRNVMLDSNFNTKLGDFGLARMMDHGKGSQTTILAGTTGYLDTESATRGKASRV 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04872 96 Gene3D Transferase(Phosphotransferase) domain 1 5 95 - -
Mepo2g04872 96 Pfam Protein kinase domain 15 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04872 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04872 96 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Mepo2g04872 96 SUPERFAMILY Protein kinase-like (PK-like) 12 91 IPR011009 -
Mepo2g04872 96 PANTHER - 12 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04872 Mepo-Chr2 56934960 56935250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04872 14 95 Receptor kinase-like Gene Family AT5G10530 67.073 8.40e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo2g04872 Pkinase 4.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04872 - - cave:132178871 129.413