Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04866 ATGGGTGAGTGTGAGATATCTCTACCTAACTCAGAGAAAGAACCTATCACACATAAAACTTCATCTTCGGACTCGGTTGAAAAGAGACACAAAAGACCAAGAGAAACCAACCACCCGGTTTACAGAGGGGTTCGTATGCGGGCATGGGGAAAATGGGTATCGGAAATTCGCGAACCGAGGAAGAAGAATCGGATCTGGCTCGGAACGTTTGCCACGCCGGAGATGGCAGCACGAGCACATGACGTGGCAGCACGAGCTATCAAAGGTAACTCCGCCATACTCAACTTCCCTGAATTCGCCGCTTCAATGCCCCGACCCGATTCAAACTCACCTCGTGATGTTCAAGCTGCTGCTGTTAAAGCCGCTGCTATGGAAGTTCCCGATCAACAAACATCATCATCTTCGTTTTCACAGTCTTTGTCTTCATCTTCATCGTCCTGTTCATTGGCGGTTTCTTCGTCAGATGAACCTTCAACACCAGATGAACTTGGTGAAATAGTAGAACTACCACCATTGGGAACGAGTTTTGAATTACCTGACCCGAGTAATATGGTATTTTCAGACCCATGGCTTTATTCACACTCTTGGTATAATCTTGACAGCATTTACGATGAAAGGGATTATTTTATGGAGGATCAGATTTCAATGCAACAAGACGACAACAACAACAACTACTCTGAGAATATTACTACAAGTATGATTCTTTCTGGTTTTGAGGGTACTTCTTTGTGGCACCAGCAACAGCATTAA 750 0.448 MGECEISLPNSEKEPITHKTSSSDSVEKRHKRPRETNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAARAIKGNSAILNFPEFAASMPRPDSNSPRDVQAAAVKAAAMEVPDQQTSSSSFSQSLSSSSSSCSLAVSSSDEPSTPDELGEIVELPPLGTSFELPDPSNMVFSDPWLYSHSWYNLDSIYDERDYFMEDQISMQQDDNNNNYSENITTSMILSGFEGTSLWHQQQH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04866 249 MobiDBLite consensus disorder prediction 126 140 - -
Mepo2g04866 249 FunFam Ethylene-responsive transcription factor 2 39 98 - -
Mepo2g04866 249 Pfam AP2 domain 39 89 IPR001471 GO:0003700|GO:0006355
Mepo2g04866 249 MobiDBLite consensus disorder prediction 120 140 - -
Mepo2g04866 249 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Mepo2g04866 249 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Mepo2g04866 249 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Mepo2g04866 249 MobiDBLite consensus disorder prediction 1 39 - -
Mepo2g04866 249 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Mepo2g04866 249 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Mepo2g04866 249 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Mepo2g04866 249 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 176 - -
Mepo2g04866 249 MobiDBLite consensus disorder prediction 17 39 - -
Mepo2g04866 249 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04866 Mepo-Chr2 56886223 56887434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04866 4 188 AP2-EREBP Transcription Factor Family AT5G11590 58.947 2.18e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g04866 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04866 K09286 - gmx:100778201 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04866 2 56886223 56887434 Mepo2g04866 2 56886223 56887434 ECH
Mepo2g04866 2 56886223 56887434 Mepo7g00386 7 6829985 6830506 PCT