Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04857 ATGGAGAGCACACTTAAGTCCTTTAGAGATGGTGAGTCGGTGCTGGACCTCAGCCCAAGATCCGCCGTTGGTGGCGGTGTTGAGGATGTCTACGGTGAAGATTGTGCTACTGAGGATCAACTTGTCACCCCTTGGACCTTCTCTGTTGCCAGTGGGTACTCTTTGCTGAGGGATCCACAATACAACAAAGGGCTTGCTTTCACCGAGAAAGAGAGGGATGCGCATTATTTGCGTGGCCTCTTACCTCCCACTGTCAGCAGCCAGCAACTTCAGGAGAAGAAGCTTATGCACAACATCCGCCAATATGAGGTTCCTTTGCAAAAGTATGTGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTATAAACTTCTAATTGACAATGTTGAGGAATTGCTCCCAATTGTATATACTCCGGTTGTTGGTGAGGCTTGCCAGAAATATGGGAGCATATACAAGCGTCCTCAGGGTTTATATATTAGTTTGAAAGAGAAGGGAAAAATTCTTGAGGTTTTAAAAAACTGGCCTGAGAGAAGTATTCAAGTTATTGTTGTAACTGACGGTGAGCGGATTTTGGGACTCGGAGATCTTGGATGCCAGGGTATGGGAATTCCTGTTGGTAAATTGGCTCTGTACTCTGCACTAGGAGGAGTTCGTCCTTCAGCATGTTTGCCAGTTACAATCGATGTGGGGACAAATAATGAGAAATTACTGAATGATGAGTTTTACATTGGCCTTAGACAAAAGAGGGCAACAGGAAAGGAATACTATGACCTTCTGCACGAGTTCATGACTGCAGTGAAGCAAAACTATGGGGAAAAAGTTCTTGTACAGTTTGAAGATTTTGCAAATCACAATGCTTTTGAATTGCTTGCAAAATACGGTACAACTCATCTTGTTTTCAACGACGATATACAGGGGACTGCAGCTGTTGTTCTAGCTGGAGTTGTAGCAGCCCTGAAGTTGATTGGTGGTACCTTACCTGAGCATACATTCCTCTTCCTCGGTGCTGGAGAAGCAGGAACTGGTATAGCTGAGCTAATTGCTCTTGAGATGTCAAAGCAGACTAAGGCACCTATAGAAGAGAGTCGTAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCACGAGCGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACACGAGCCTGTTAGCACTCTCCTAGATGCTGTTAAGATAATTAAGCCTACGGTTCTGATTGGATCATCAGGAGTGGGAAAAACATTTACAAAGGAAGTAGTTGAGGCTATGACAGAAATCAATAAAATTCCTCTCATTTTGGCTCTTTCCAATCCAACCTCACAGTCTGAGTGTACAGCTGAGGAGGCATACACATGGAGTGAGGGCCGTGCGATTTTTGCTAGCGGGAGTCCATTTGATCCTGTTGAATACAAAGGCAAAACTTATTATTCTGGCCAGTCCAACAATGCTTACATTTTCCCAGGCTTTGGTTTGGGTATAGTGATGTCGGGAGCAATCCGAGTACATGATGATATGCTTCTAGCAGCTTCGGAAGCCTTGGCGAAGCAAGTGACAGAGGAGAACTACAAAAAAGGCTTGACTTATCCACCTTTCTCTGATATCAGAAAAATTTCGGCCAACATAGCTGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCTACACATCTTCCTCGTCCTGAGAATCTCGTCAAGTATGCTGAGAGTTGCATGTATTCCCCTTTGTACCGCAACTACAGGTCTTTAACAGTGTTGAGGCGCGATGGTGCGTGCACGACAATGGTGGTGGTTTTGGTTTTCCGATGGAATGTGAAGAGAGATGACAGAGTTTGCTTTTGA 1872 0.4455 MESTLKSFRDGESVLDLSPRSAVGGGVEDVYGEDCATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVSSQQLQEKKLMHNIRQYEVPLQKYVAMMDLQERNERLFYKLLIDNVEELLPIVYTPVVGEACQKYGSIYKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYSALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGKEYYDLLHEFMTAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTAAVVLAGVVAALKLIGGTLPEHTFLFLGAGEAGTGIAELIALEMSKQTKAPIEESRKKIWLVDSKGLIVSSRANSLQHFKKPWAHEHEPVSTLLDAVKIIKPTVLIGSSGVGKTFTKEVVEAMTEINKIPLILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYKGKTYYSGQSNNAYIFPGFGLGIVMSGAIRVHDDMLLAASEALAKQVTEENYKKGLTYPPFSDIRKISANIAANVAAKAYELGLATHLPRPENLVKYAESCMYSPLYRNYRSLTVLRRDGACTTMVVVLVFRWNVKRDDRVCF 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04857 623 Pfam Malic enzyme, NAD binding domain 307 559 IPR012302 GO:0051287
Mepo2g04857 623 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 PRINTS Malic enzyme signature 437 453 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Mepo2g04857 623 SMART malic_2 116 297 IPR012301 GO:0004471
Mepo2g04857 623 FunFam Malic enzyme 50 304 - -
Mepo2g04857 623 Gene3D - 305 602 - -
Mepo2g04857 623 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Mepo2g04857 623 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 30 306 IPR046346 -
Mepo2g04857 623 FunFam Malic enzyme 305 591 - -
Mepo2g04857 623 PANTHER MALIC ENZYME-RELATED 20 591 - -
Mepo2g04857 623 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 594 IPR036291 -
Mepo2g04857 623 CDD NAD_bind_1_malic_enz 307 585 - -
Mepo2g04857 623 PIRSF ME 24 593 IPR001891 GO:0004470|GO:0004471
Mepo2g04857 623 Gene3D - 50 304 IPR037062 GO:0004471
Mepo2g04857 623 SMART Malic_M_2 307 560 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04857 Mepo-Chr2 56810894 56827494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04857 K00029 - gmx:100782096 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04857 2 56810894 56827494 Mepo1g04364 1 51287650 51292804 ECH
Mepo2g04857 2 56810894 56827494 Mepo6g04162 6 53755492 53760629 ECH
Mepo2g04857 2 56810894 56827494 Mepo3g07648 3 89771390 89776754 ECH
Mepo2g04857 2 56810894 56827494 Mepo2g04857 2 56810894 56827494 ECH