Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04842 ATGAATTTCATTTTCTATGTTTTATTACTTCTTCTCGTTCTACAAAATCCCATTGTAACACATTGTCATACAAAGGGACTTCGACCAAAACCTTCTACTGGATTTGGAATGTCTGCCAATATGACCAAAGTCCAAGAATCAGAACAACAATTCATGAAATGGGTGAAATTTGTTGGTGGTCTTAAACACACTGTCTTTAGAACAGCAAAAAATAAGCTTTTTCCTTCTTACACTTTGAACGTTTATAAACATTCAAGTAAAGGAGGATTTTCATCAATTCAAGCAGCCATTGATTCCCTTCCCTTCATTAATTTAGTGAGAGTTGTCATTAAGGTTCATGCAGGGGTTTACACAGAGAAAGTTAGCATTCCTGCATTAAAATCATTCATAACCATACAAGGAGCAGGTGCAGATAAAACAATTGTTCAATGGGGTGACACTGCTCTAACTCCTAATCCTGGAGCAAAAGGACAGACACTAGGAACTTATGGTTCTGCAACTTTTGCAGTGAATTCACCTTATTTCATTGCTAAGAACATCACATTCAAAAATACTGCTCCAATTCCTAAACCAGGAGCAGTTGGAAAACAAGGAGTGGCATTGAGAATTTCAGCTGATACTGCCATGTTTCTTGGCTGCAAATTCTTAGGGGCACAGGACACACTGTATGATCATATTGGTAGGCACTATTACAAAGATTGTTATATTGAAGGCTCTGTTGATTTCATATTTGGCAATGCTCTCTCTCTTTTTGAGGGGTGTCACGTGCATGCAATAGCACAAAATATAGGAGCACTAACAGCACAAGGAAGGAACAGTTTATTAGAAGACACGGGATTCTCTTTTGTAAACTGTAAGGTCACGGGATCAGGAGCACTATACCTTGGAAGGGCTTGGGGTCCCTTTTCTCGGGTTGTCTTTGCTTACACTTACATGGACAATATCATCATTCCCAAAGGATGGTACAATTGGGGTGATCCCAACCGTGAAATGACTGTATTCTATGGACAATACAAATGCACAGGACCAGGAGCAAGCTATGCAGGGAGGGTAGCATGGTCAAGGGAGCTCACTGATGAGGAAGCTAAACCATTTATTTCACTCAGTTATGTTGATGGGTCTGAGTGGATCAATTCTTTCTTTTGA 1146 0.3962 MNFIFYVLLLLLVLQNPIVTHCHTKGLRPKPSTGFGMSANMTKVQESEQQFMKWVKFVGGLKHTVFRTAKNKLFPSYTLNVYKHSSKGGFSSIQAAIDSLPFINLVRVVIKVHAGVYTEKVSIPALKSFITIQGAGADKTIVQWGDTALTPNPGAKGQTLGTYGSATFAVNSPYFIAKNITFKNTAPIPKPGAVGKQGVALRISADTAMFLGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNIGALTAQGRNSLLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASYAGRVAWSRELTDEEAKPFISLSYVDGSEWINSFF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04842 381 ProSitePatterns Pectinesterase signature 2. 236 245 IPR033131 -
Mepo2g04842 381 FunFam Pectinesterase 75 379 - -
Mepo2g04842 381 SUPERFAMILY Pectin lyase-like 75 379 IPR011050 -
Mepo2g04842 381 Pfam Pectinesterase 85 373 IPR000070 GO:0030599|GO:0042545
Mepo2g04842 381 Gene3D - 76 380 IPR012334 -
Mepo2g04842 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04842 Mepo-Chr2 56681494 56684627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04842 1 377 Carbohydrate Esterase AT5G47500 44.327 2.18e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04842 K01051 - gmx:100802832 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04842 2 56681494 56684627 Mepo2g04842 2 56681494 56684627 ECH