Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04835 ATGGAGAAGACCATGATTCTGTCTTTTCTCCACCTCCTTCTTCTCCTTCTTCCAAATGCAGCAAAAGCTGCCATTGGTATAGGCATTGGTGTTGGCATTGGCATTGGCAATGGCAATGATGGTCCTAACATCCCAGGATCTTCAGGATCATCTGTATCAAATCTAAACAATGCTTACAAAGCTCTTCAAGCTTGGAAATCTTCAATCACTGATGACCCTTTAAAGATTTTAGAAACATGGATTGGTCCTGATGTTTGTTCTTATAAAGGAATATTTTGTGATACTACTAGTAATACTCCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTCCAAGGAACATTTGTAAAAGAACTCTCTTTACTATCTGATATAACACTTCTCCACCTCAACACTAATAGATTTTCAGGTACAGTTCCTGAAACATTCAGAGACTTCACATTTCTTCAAGAACTAGACCTCAGCAACAACCAACTTTCTGGTTCTTTCCCTGTAGTTACTTTAAACATGCCAAGTTTAATTTACTTGGACCTTAGATTCAACAACTTCACAGGGACACTTCCTGAAGAGCTTTTCAACAAGAAACTTGATGCAATATTTCTCAACAACAATCAATTTAGTGGTGAAATACCTCAAAGCTTTGGTAACTCACCTGCATCAGTGATCAACTTAGCTAACAATATGTTGAGTGGAAACATTCCAGCAAGCTTTGGTTTCATGAGTTCTAAACTAAAAGAGATTCTTTTTCTTAATAATCAGTTAACAGGTTGTATACCTCAAGGTGTTGGTATATTCACAGAAATGCAGGTTCTTGATGTGAGTTTCAATTCACTTGTGGGTCATTTACCAGATACAATATCTTGTTTGCAAGATATTGAGGTTCTTAATTTGGCACATAACAATCTTTCTGGTGATATATCTGATGTGATATGTTCTTTGAAAAGCTTGTTGAATCTAACTGTTGCTTATAATTTCTTTTCTGGGTTTAGTCAAGAATGTTCAAGGCTTTTCAATGTTGGTTTTGACTTCTCAGATAATTGCATTCCTGGTAGGAATATGCAGAAACCTCGACCTGAGTGTTCTGTGATCCCTGGTGGTAATTTGAATTGTCTTAGAATTCCTACCCTAAAACCTCTTGTTTGTGGTACTTTGGCTGCAAGTACTTCTAAGTACACAAATATTCCTTCATCATCTCCATGA 1203 0.3666 MEKTMILSFLHLLLLLLPNAAKAAIGIGIGVGIGIGNGNDGPNIPGSSGSSVSNLNNAYKALQAWKSSITDDPLKILETWIGPDVCSYKGIFCDTTSNTPFVAGIDLNHANLQGTFVKELSLLSDITLLHLNTNRFSGTVPETFRDFTFLQELDLSNNQLSGSFPVVTLNMPSLIYLDLRFNNFTGTLPEELFNKKLDAIFLNNNQFSGEIPQSFGNSPASVINLANNMLSGNIPASFGFMSSKLKEILFLNNQLTGCIPQGVGIFTEMQVLDVSFNSLVGHLPDTISCLQDIEVLNLAHNNLSGDISDVICSLKSLLNLTVAYNFFSGFSQECSRLFNVGFDFSDNCIPGRNMQKPRPECSVIPGGNLNCLRIPTLKPLVCGTLAASTSKYTNIPSSSP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04835 400 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 47 375 - -
Mepo2g04835 400 Gene3D Ribonuclease Inhibitor 55 220 IPR032675 -
Mepo2g04835 400 Pfam Leucine rich repeat N-terminal domain 56 94 IPR013210 -
Mepo2g04835 400 Gene3D Ribonuclease Inhibitor 221 355 IPR032675 -
Mepo2g04835 400 FunFam Leucine-rich repeat receptor protein kinase EMS1 234 334 - -
Mepo2g04835 400 PRINTS Leucine-rich repeat signature 150 163 - -
Mepo2g04835 400 PRINTS Leucine-rich repeat signature 290 303 - -
Mepo2g04835 400 FunFam Leucine-rich repeat extensin-like protein 1 59 217 - -
Mepo2g04835 400 SUPERFAMILY L domain-like 59 338 - -
Mepo2g04835 400 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04835 Mepo-Chr2 56629432 56630732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04835 54 363 Leucine-rich Repeat extension Gene Families AT3G24480 50.799 3.25e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04835 - - gmx:100820611 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04835 2 56629432 56630732 Mepo2g04835 2 56629432 56630732 ECH