Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04832 ATGATGAATAATAAGATGAGCAACGTTAGTAGCTCTGATCTCATAGATTCTAAGCTGGAAGAGCACCAGTTGTGTGGATCCAAACACTGCCCTCGCTGTGGACACAAATTTGATCAAGGCAAGCCGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAATTGATTGAACATCTTGAAGCCAAAGTTGAGTCAAAGAACATGCAGAAATCACACCCTTTGATTGATGAATTCATTCTCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCTGAAAAACTTCCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACACGAAAGAGGAGAAAGATTCAAACCGAAGAGTGTGACTTACAAGGAAGTACAGGAGGAGAAACAAGATGGCACAAAACTGGTAAGACCAGACCCGTTATGGTTAATGGTAAACAAAAAGGTTGCAAGAAAATTCTTGTTCTCTACACCAACTTTGGCAAGAATCGAAAACCTGAGAAGACGAATTGGGTGATGCATCAATACCATCTTGGACAACATGAAGAAGAGAAAGAAGGAGAGCTTGTTGTTTCAAAGATATTTTATCAGACACAGCCAAGACAGTGTAATTGGTCTGATAATAATCAAAGAATAATTAGTGCAACAACAACAACTGGTGAAGTAAGTGGTGGAGAACCTAATTATAATATCAATGGAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCTAAGGAAATTGTTACTCAGATTCATAGAGATGAAATGTCTGCTGTTGTTGGTGTCCCTAGTCCTTTAACAAGCTTCACAAATGCCTTGGATATTCAACACCTTAAATCTGATCATTTCGGCTTCATCCCATTTCGAAAAAGCTATGATGAGGTTGGAATAGGAGAAGGTTCTACAACAAGAGAAATGCAAGCATCAGGAGGCTCATGTGATCAGGAAGTGCATGAAAGACAGCATCATGTATTGGCACATCATCATCAACAACAACAACATCATCAGCAACAGCAACAGCAACACGAGCATCATGTGCACCAGCAGATTAGTGCAAACGCAGCTTTCCATATAAGTAGGCCTTCCAATCCCATCTCCACTATCATCTCTCCACCTCCCCTCCACCACACATCTACCATCATCCTTGATGACAATTCTTACCATGTTTCAACAATCATGCTCCAACAGAATGAAAATTTTCAGCAACAGCAGCAGCAACAACATCATAAACTAGGTGGTGGAAGGTCTGCGTCTGGTTTGGAGGAAGTCATTATGGGGTGCACTTCAACGTCGTCTGATATCAAAGAGGAGTCATCTATTAGAAACCAACAAGAAGCTGAGTGGTTGAAATACTCTTCTTACTGGCCAGTCGACCCTCATGACAACAACCATCATCATCATGATTAG 1455 0.4089 MMNNKMSNVSSSDLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNQRIISATTTTGEVSGGEPNYNINGRRDSGSGSSSSKEIVTQIHRDEMSAVVGVPSPLTSFTNALDIQHLKSDHFGFIPFRKSYDEVGIGEGSTTREMQASGGSCDQEVHERQHHVLAHHHQQQQHHQQQQQQHEHHVHQQISANAAFHISRPSNPISTIISPPPLHHTSTIILDDNSYHVSTIMLQQNENFQQQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDIKEESSIRNQQEAEWLKYSSYWPVDPHDNNHHHHD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04832 484 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 360 IPR044799 GO:0003700
Mepo2g04832 484 FunFam NAC domain-containing protein 73 56 217 - -
Mepo2g04832 484 SUPERFAMILY NAC domain 43 213 IPR036093 GO:0003677|GO:0006355
Mepo2g04832 484 Gene3D NAC domain 56 217 IPR036093 GO:0003677|GO:0006355
Mepo2g04832 484 MobiDBLite consensus disorder prediction 347 364 - -
Mepo2g04832 484 Pfam No apical meristem (NAM) protein 48 194 IPR003441 GO:0003677|GO:0006355
Mepo2g04832 484 MobiDBLite consensus disorder prediction 338 364 - -
Mepo2g04832 484 ProSiteProfiles NAC domain profile. 47 213 IPR003441 GO:0003677|GO:0006355
Mepo2g04832 484 MobiDBLite consensus disorder prediction 235 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04832 Mepo-Chr2 56612917 56617659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04832 10 471 NAC Transcription Factor Family AT5G56620 50.529 2.21e-136 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g04832 NAM 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04832 - - tpra:123915534 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04832 2 56612917 56617659 Mepo2g04832 2 56612917 56617659 ECH